RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 FAM219BQ5XKK7 198 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 C19orf35Q6ZS72 473 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 ERI1Q8IV48 349 aaKnown RBP3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 GABRG1Q8N1C3 465 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR2T33Q8NG76 320 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR4K14Q8NGD5 310 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 IL1F10Q8WWZ1 152 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 NABP1Q96AH0 204 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 PPP1R16AQ96I34 528 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF578Q96N58 590 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR5B2Q96R09 309 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 CLCC1Q96S66 551 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 MBOAT4Q96T53 435 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLC35A5Q9BS91 424 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 TEKT3Q9BXF9 490 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 SP140LQ9H930 580 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 MRPS30Q9NP92 439 aaKnown RBP3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 ELOVL2Q9NXB9 296 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 NDE1Q9NXR1 346 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 BFARQ9NZS9 450 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 NTNG1Q9Y2I2 539 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 MRPL11Q9Y3B7 192 aaKnown RBP3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 PTPRKQ15262 1439 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRAPPC8Q9Y2L5 1435 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 NEO1Q92859 1461 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 CFAP43Q8NDM7 1665 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 CCDC182A6NF36 153 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF701M0R085 212 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRAFD1O14545 582 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 NVLO15381 856 aaKnown RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR2J3O76001 311 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 P04436 131 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 SERPIND1P05546 499 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 CCDC172P0C7W6 258 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 HSD17B1P14061 328 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 GCFC2P16383 781 aaKnown RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 POLR2EP19388 210 aaKnown RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 KITLGP21583 273 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 DAOAP59103 153 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 RND3P61587 244 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAB11AP62491 216 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ST3GAL3Q11203 375 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ILKQ13418 452 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 CUL1Q13616 776 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 NECTIN1Q15223 517 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAB11BQ15907 218 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 MTHFSDQ2M296 383 aaKnown RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 MS4A18Q3C1V0 323 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 C2CD6Q53TS8 623 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 FAM120AOSQ5T036 256 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 REP15Q6BDI9 236 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 VTCN1Q7Z7D3 282 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 LRRTM1Q86UE6 522 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLC47A2Q86VL8 602 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 HPS6Q86YV9 775 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF440Q8IYI8 595 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR2L13Q8N349 312 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 FBXL16Q8N461 479 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 PQLC3Q8N755 202 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF491Q8N8L2 437 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ATP6V0D2Q8N8Y2 350 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 SUMF1Q8NBK3 374 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 NUP37Q8NFH4 326 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR9A1PQ8NGU1 263 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 RFESDQ8TAC1 157 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ACMSDQ8TDX5 336 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 CXorf40BQ96DE9 158 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 PLEKHA8Q96JA3 519 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 C18orf12Q96KH6 178 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 PANX2Q96RD6 677 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 CNN2Q99439 309 aaKnown RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 HSD17B14Q9BPX1 270 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 MAPKAP1Q9BPZ7 522 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 RBM4BQ9BQ04 359 aaKnown RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 MRPL37Q9BZE1 423 aaKnown RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 RAB34Q9BZG1 259 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 ELOVL6Q9H5J4 265 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 MOB1AQ9H8S9 216 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 NHEJ1Q9H9Q4 299 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 PTTG3PQ9NZH4 202 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 WRAP73Q9P2S5 460 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 MGAT4AQ9UM21 535 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 PDE10AQ9Y233 779 aa3.59□□□□□ -1.83
HMGB1P48-201ENST00000446155 FHOD3Q2V2M9 1422 aa3.59□□□□□ -1.84
HMGB1P48-201ENST00000446155 GON4LQ3T8J9 2241 aa3.59□□□□□ -1.84
HMGB1P48-201ENST00000446155 TTC37Q6PGP7 1564 aa3.59□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRGV8A0A0C4DH27 118 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 A0A0J9YWU9 116 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 LOC100653049A0A140TA62 436 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 SAGE2PA6NJ88 616 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ARHGEF33A8MVX0 844 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 TEX46H3BTG2 121 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 K7EQG2 157 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 WWP2O00308 870 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 FCN1O00602 326 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 CLOCKO15516 846 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 PFKFB2O60825 505 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms