RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 EVPLLA8MZ36 301 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 ZNF208O43345 1280 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 DNPH1O43598 174 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 ATE1O95260 518 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 PGM3O95394 542 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 THBDP07204 575 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 TROVE2P10155 538 aaKnown RBP eCLIP18.69■□□□□ 0.58
CDKN3-204ENST00000442975 ARAFP10398 606 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 CXCR1P25024 350 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 ACAA2P42765 397 aaKnown RBP18.69■□□□□ 0.58
CDKN3-204ENST00000442975 OR3A2P47893 321 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 HOXC5Q00444 222 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 CDK6Q00534 326 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 WBP2NLQ6ICG8 309 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 SPNS3Q6ZMD2 512 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 ZNF100Q8IYN0 542 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 STEAP2Q8NFT2 490 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 KISS1RQ969F8 398 aaPredicted RBP18.69■□□□□ 0.58
CDKN3-204ENST00000442975 HS3ST6Q96QI5 342 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 CPPED1Q9BRF8 314 aaPredicted RBP18.69■□□□□ 0.58
CDKN3-204ENST00000442975 UBTD1Q9HAC8 227 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 FGFR1OP2Q9NVK5 253 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 NDUFAF1Q9Y375 327 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 CHST2Q9Y4C5 530 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 F8P00451 2351 aa18.69■□□□□ 0.58
CDKN3-204ENST00000442975 TEP1Q99973 2627 aaKnown RBP18.68■□□□□ 0.58
CDKN3-204ENST00000442975 ZNF724A8MTY0 619 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 GCM2O75603 506 aaPredicted RBP18.68■□□□□ 0.58
CDKN3-204ENST00000442975 ADAP00813 363 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 EDNRAP25101 427 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 AQP1P29972 269 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 IDUAP35475 653 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 SLC35A1P78382 337 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 HSP90B2PQ58FF3 399 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 KRT73Q86Y46 540 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 CCDC103Q8IW40 242 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 FOXC2Q99958 501 aa18.68■□□□□ 0.58
CDKN3-204ENST00000442975 NOSIPQ9Y314 301 aaKnown RBP18.68■□□□□ 0.58
CDKN3-204ENST00000442975 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.67■□□□□ 0.58
CDKN3-204ENST00000442975 ZNF814B7Z6K7 855 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 RAMP1O60894 148 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 IGHV3-9P01782 118 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 VIMP08670 466 aaKnown RBP18.67■□□□□ 0.58
CDKN3-204ENST00000442975 IMPDH2P12268 514 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 FPR1P21462 350 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 MTPNP58546 118 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 BNIP2Q12982 314 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 SCARB2Q14108 478 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 CYP51A1Q16850 503 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 BEX5Q5H9J7 111 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 SFRP5Q5T4F7 317 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 REEP3Q6NUK4 255 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 DLEU7Q6UYE1 221 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 UBE2J2Q8N2K1 259 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 ADAM19Q9H013 955 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 HEATR5AQ86XA9 2040 aa18.67■□□□□ 0.58
CDKN3-204ENST00000442975 ABCA4P78363 2273 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 IGKV3D-15A0A087WSY6 115 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 ZNF716A6NP11 495 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 LYZL6O75951 148 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 ETS2P15036 469 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 SLC6A2P23975 617 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 ADSLP30566 484 aaPredicted RBP18.66■□□□□ 0.58
CDKN3-204ENST00000442975 PRKAR1BP31321 381 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 MAP2K6P52564 334 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 NFYCQ13952 458 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 P2RY6Q15077 328 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 OR7A5Q15622 319 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 STK11Q15831 433 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 Q6ZT83 130 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 BHLHA15Q7RTS1 189 aaPredicted RBP18.66■□□□□ 0.58
CDKN3-204ENST00000442975 RETREG3Q86VR2 466 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 APH1AQ96BI3 265 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 ALPK1Q96QP1 1244 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 NAA11Q9BSU3 229 aaPredicted RBP18.66■□□□□ 0.58
CDKN3-204ENST00000442975 SPATA5L1Q9BVQ7 753 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 HDHD5Q9BXW7 423 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 OR10A4Q9H209 315 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 ANGPT4Q9Y264 503 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 TRAPPC4Q9Y296 219 aa18.66■□□□□ 0.58
CDKN3-204ENST00000442975 HIVEP1P15822 2718 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 GPR171O14626 319 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 EIF1BO60739 113 aaKnown RBP18.65■□□□□ 0.58
CDKN3-204ENST00000442975 ITGADQ13349 1161 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 CEACAM7Q14002 265 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 CAPRIN1Q14444 709 aaKnown RBP18.65■□□□□ 0.58
CDKN3-204ENST00000442975 PDK3Q15120 406 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 DEFB113Q30KQ7 82 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 CASP12Q6UXS9 341 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 C3orf49Q96BT1 292 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 MBD6Q96DN6 1003 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 PLPPR2Q96GM1 343 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 CGREF1Q99674 301 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 POTEKPQ9BYX7 375 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 TMEM38AQ9H6F2 299 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 ADPRHL2Q9NX46 363 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 RPS6KB2Q9UBS0 482 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 SLC13A4Q9UKG4 626 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 MPDZO75970 2070 aa18.65■□□□□ 0.58
CDKN3-204ENST00000442975 A8MVM7 634 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms