RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SDCCAG3Q96C92 435 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 HSH2DQ96JZ2 352 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 GORASP2Q9H8Y8 452 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 DCAF13Q9NV06 445 aaKnown RBP14.35□□□□□ -0.11
USP39-205ENST00000442708 ADPRHL2Q9NX46 363 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 RPS6KB2Q9UBS0 482 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 SNX13Q9Y5W8 968 aa14.35□□□□□ -0.11
USP39-205ENST00000442708 USP9YO00507 2555 aaPredicted RBP14.35□□□□□ -0.11
USP39-205ENST00000442708 DOPEY2Q9Y3R5 2298 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 IGHV3-15A0A0B4J1V0 119 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 NPIPB7O75200 414 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 RCBTB2O95199 551 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 PTNP21246 168 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 ENPP1P22413 925 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 DIO1P49895 249 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 AGFG1P52594 562 aaKnown RBP14.34□□□□□ -0.11
USP39-205ENST00000442708 NCALDP61601 193 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 MS4A2Q01362 244 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 EGR4Q05215 589 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 ZNF239Q16600 458 aaKnown RBP14.34□□□□□ -0.11
USP39-205ENST00000442708 SPATS1Q496A3 300 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 ALG10BQ5I7T1 473 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 ULK3Q6PHR2 472 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 TMPPEQ6ZT21 453 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 TSEN54Q7Z6J9 526 aaKnown RBP14.34□□□□□ -0.11
USP39-205ENST00000442708 P3H2Q8IVL5 708 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 ZNF808Q8N4W9 903 aaPredicted RBP14.34□□□□□ -0.11
USP39-205ENST00000442708 SLC38A4Q969I6 547 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 INTS12Q96CB8 462 aaKnown RBP14.34□□□□□ -0.11
USP39-205ENST00000442708 AMBRA1Q9C0C7 1298 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 RNF122Q9H9V4 155 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 TMEM27Q9HBJ8 222 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 MAGEL2Q9UJ55 1249 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 PRPF19Q9UMS4 504 aaKnown RBP14.34□□□□□ -0.11
USP39-205ENST00000442708 SLC9A8Q9Y2E8 581 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 ZNF175Q9Y473 711 aa14.34□□□□□ -0.11
USP39-205ENST00000442708 SPIN1Q9Y657 262 aaPredicted RBP14.34□□□□□ -0.11
USP39-205ENST00000442708 SPTBN1Q01082 2364 aaKnown RBP14.33□□□□□ -0.11
USP39-205ENST00000442708 CACNA1CQ13936 2221 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ELOA3DA6NLF2 546 aaPredicted RBP14.33□□□□□ -0.12
USP39-205ENST00000442708 A8MVM7 634 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ZNF814B7Z6K7 855 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 SMAD9O15198 467 aaKnown RBP14.33□□□□□ -0.12
USP39-205ENST00000442708 CLDN1O95832 211 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 IL2RAP01589 272 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ATP6V1B2P21281 511 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 CLK1P49759 484 aaKnown RBP14.33□□□□□ -0.12
USP39-205ENST00000442708 SMSP52788 366 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 RAC3P60763 192 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ELOA3BQ3SY89 546 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 PDSS1Q5T2R2 415 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 PPP4R4Q6NUP7 873 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ZNF613Q6PF04 617 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 LINC00114Q6XXX2 140 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 DEF8Q6ZN54 512 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 P4HA3Q7Z4N8 544 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ARHGAP24Q8N264 748 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ELOA3Q8NG57 546 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 ADAMTS16Q8TE57 1224 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 DNAJA4Q8WW22 397 aaPredicted RBP14.33□□□□□ -0.12
USP39-205ENST00000442708 DDIT4LQ96D03 193 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 KTI12Q96EK9 354 aaPredicted RBP14.33□□□□□ -0.12
USP39-205ENST00000442708 TM9SF2Q99805 663 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 BTBD10Q9BSF8 475 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 THTPAQ9BU02 230 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 PTDSS2Q9BVG9 487 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 C12orf10Q9HB07 376 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 PAQR5Q9NXK6 330 aaPredicted RBP14.33□□□□□ -0.12
USP39-205ENST00000442708 SLC7A7Q9UM01 511 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 HDGFL3Q9Y3E1 203 aa14.33□□□□□ -0.12
USP39-205ENST00000442708 A0A087WUJ7 227 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 TRAPPC13A5PLN9 417 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 HSPB2A8KAH6 182 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 SULT2B1O00204 365 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 GYG2O15488 501 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 PRKD3O94806 890 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 SYNGR4O95473 234 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 PMS2P2O95744 297 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 TMIGD3P0DMS9 266 aaPredicted RBP14.32□□□□□ -0.12
USP39-205ENST00000442708 FKBP2P26885 142 aaKnown RBP14.32□□□□□ -0.12
USP39-205ENST00000442708 CHRNB4P30926 498 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 MAP2K6P52564 334 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 PIN1Q13526 163 aaPredicted RBP14.32□□□□□ -0.12
USP39-205ENST00000442708 GUSBP1Q15486 140 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 HSPB2Q16082 182 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 IFI44LQ53G44 452 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 C1orf140Q5VVS0 124 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 XKRXQ6PP77 449 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 GDF7Q7Z4P5 450 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 RELL2Q8NC24 303 aaPredicted RBP14.32□□□□□ -0.12
USP39-205ENST00000442708 RNF217Q8TC41 542 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 RNF128Q8TEB7 428 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 ABHD3Q8WU67 409 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 LZICQ8WZA0 190 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 CPNE4Q96A23 557 aaPredicted RBP14.32□□□□□ -0.12
USP39-205ENST00000442708 SLC47A1Q96FL8 570 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 PSMG3-AS1Q96PY0 264 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 PRSS27Q9BQR3 290 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 POTEKPQ9BYX7 375 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 UCK2Q9BZX2 261 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms