RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TRBV4-1A0A0J9YWV2 114 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CDC14CA4D256 554 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ARRDC5A6NEK1 342 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CPSF4LA6NMK7 179 aaKnown RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 LINC00587B1AMM8 73 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 C9orf172C9J069 976 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 FAAHO00519 579 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TPST2O60704 377 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 GABARAPO95166 117 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 DLGAP3O95886 979 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 FTH1P19P0C7X4 201 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ELAVL4P26378 380 aaKnown RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 IL12BP29460 328 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 LCN1P31025 176 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 FOLR3P41439 243 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 RNF144AP50876 292 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 OR2B6P58173 313 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SLC26A5P58743 744 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ADARB1P78563 741 aaKnown RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 HOXC5Q00444 222 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 PLCXD2Q0VAA5 305 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ST3GAL3Q11203 375 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 GPR50Q13585 617 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 FAM69BQ5VUD6 431 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 GDPD3Q7L5L3 318 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 KIF18BQ86Y91 864 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CMIPQ8IY22 773 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF527Q8NB42 609 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SLC7A13Q8TCU3 470 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 DIO2Q92813 273 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ADOQ96SZ5 270 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 PRR14Q9BWN1 585 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 RPH3AQ9Y2J0 694 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CUL9Q8IWT3 2517 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 LOC102723996A0A087X1L8 192 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SPAARA0A1B0GVQ0 90 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 A0A1W2PNU3 283 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 A0A1W2PRG6 482 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SERINC4A6NH21 518 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 MITFO75030 526 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 NDUFS6O75380 124 aaKnown RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CYP7B1O75881 506 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SNX4O95219 450 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 UMODP07911 640 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CLEC2LP0C7M8 214 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TCN2P20062 427 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SERPINB10P48595 397 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF136P52737 540 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 LIMK1P53667 647 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 RIPPLY1Q0D2K3 151 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 FGFBP1Q14512 234 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TRAM2Q15035 370 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ENTPD8Q5MY95 495 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TIPARPQ7Z3E1 657 aaKnown RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 PRR22Q8IZ63 422 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SLC34A3Q8N130 599 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CELF2-AS1Q8N7Q2 184 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF441Q8N8Z8 693 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 POC5Q8NA72 575 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 OR9Q2Q8NGE9 314 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 OR5L2Q8NGL0 311 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 CNOT9Q92600 299 aaKnown RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 SLC38A4Q969I6 547 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 KLHL15Q96M94 604 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TTYH2Q9BSA4 534 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 BCL2L14Q9BZR8 327 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 FAM118AQ9NWS6 357 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF223Q9UK11 482 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-201ENST00000442201 NUP210LQ5VU65 1888 aa7.42□□□□□ -1.22
CCDC39-201ENST00000442201 TRBV11-1A0A0K0K1C0 115 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 OR10H3O60404 316 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 FMO6PO60774 539 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 DKK1O94907 266 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 CSTAP01040 98 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 IGHEP01854 428 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 GKN3PP0CG01 181 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 NRG3P56975 720 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 NEDD8Q15843 81 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 DGUOKQ16854 277 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 TFAP2EQ6VUC0 442 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 ADGRG3Q86Y34 549 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 TCTE3Q8IZS6 198 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 LINC00471Q8N535 108 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 AQP11Q8NBQ7 271 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 NUBPLQ8TB37 319 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 DYNC2LI1Q8TCX1 351 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 MBOAT4Q96T53 435 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 FUNDC2Q9BWH2 189 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 SPRY4Q9C004 299 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 POLR2J2Q9GZM3 115 aaKnown RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 C6orf62Q9GZU0 229 aaPredicted RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 POLR2J3Q9H1A7 115 aaKnown RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 RIBC2Q9H4K1 309 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 ANKRD19PQ9H560 264 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 TESQ9UGI8 421 aaKnown RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 POFUT2Q9Y2G5 429 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 MRPS7Q9Y2R9 242 aaKnown RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 PQLC2LA1A4F0 135 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 SCDO00767 359 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms