RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 FAM120BQ96EK7 910 aaKnown RBP5.91□□□□□ -1.46
HDAC6-210ENST00000441703 TRMT61AQ96FX7 289 aaKnown RBP5.91□□□□□ -1.46
HDAC6-210ENST00000441703 ITCHQ96J02 903 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 PPP3R2Q96LZ3 170 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 NSUN5Q96P11 429 aaKnown RBP5.91□□□□□ -1.46
HDAC6-210ENST00000441703 KCNA7Q96RP8 456 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 ZNF382Q96SR6 550 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 CCL19Q99731 98 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 CPPED1Q9BRF8 314 aaPredicted RBP5.91□□□□□ -1.46
HDAC6-210ENST00000441703 CNPPD1Q9BV87 410 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 FICDQ9BVA6 458 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 PRR14Q9BWN1 585 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 BEX2Q9BXY8 128 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 PRRG3Q9BZD7 231 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 ZNF700Q9H0M5 742 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 PPIL3Q9H2H8 161 aaKnown RBP5.91□□□□□ -1.46
HDAC6-210ENST00000441703 MIXL1Q9H2W2 232 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 C14orf105Q9NVL8 296 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 LYARQ9NX58 379 aaKnown RBP5.91□□□□□ -1.46
HDAC6-210ENST00000441703 AASSQ9UDR5 926 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 Q9UFV3 132 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 FOXD3Q9UJU5 478 aaPredicted RBP5.91□□□□□ -1.46
HDAC6-210ENST00000441703 CDC42EP3Q9UKI2 254 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 UTS2RQ9UKP6 389 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 IKZF3Q9UKT9 509 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 RIMKLBQ9ULI2 386 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 SNX8Q9Y5X2 465 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 U3KQV3 271 aa5.91□□□□□ -1.46
HDAC6-210ENST00000441703 ANK3Q12955 4377 aaKnown RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 A0A1B0GVI7 797 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 FAM240BA0A1B0GVZ2 78 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 hCG_1807616A0A1W2PRN6 198 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 MBD3L4A6NDZ8 208 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 LRRC14BA6NHZ5 514 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 MBD3L5A6NJ08 208 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 AGAP14A8MT82 685 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 INMT-MINDY4F8WBC2 141 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 KLRC4-KLRK1H3BQV0 150 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 KPNA5O15131 536 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 FABP7O15540 132 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 LYRM1O43325 122 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 NME2P1O60361 137 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 B3GALNT1O75752 331 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 HRGP04196 525 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 FABP3P05413 133 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 TSPAN19P0C672 248 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 GLI4P10075 376 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 G6PDP11413 515 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 CYP4B1P13584 511 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ANXA8P13928 327 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ZNF37AP17032 561 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 NME2P22392 152 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PSMA1P25786 263 aaKnown RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PDHA2P29803 388 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PEBP1P30086 187 aaKnown RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 RFC3P40938 356 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 CRYBB2P43320 205 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 TAS2R50P59544 299 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 POLR2GP62487 172 aaKnown RBP eCLIP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PPP3R1P63098 170 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 TIAL1Q01085 375 aaKnown RBP eCLIP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 DBPQ10586 325 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 COX10Q12887 443 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 SSX1Q16384 188 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 GXYLT1Q4G148 440 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PDLIM3Q53GG5 364 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PYDC2Q56P42 97 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ZMAT1Q5H9K5 638 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 MEDAGQ5VYS4 303 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 CD276Q5ZPR3 534 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PLAG1Q6DJT9 500 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 MSANTD1Q6ZTZ1 278 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 GPRIN3Q6ZVF9 776 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 LAPTM4BQ86VI4 370 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 SLC5A8Q8N695 610 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ATG16L2Q8NAA4 619 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 VPS37AQ8NEZ2 397 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 OR4F6Q8NGB9 312 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 OR5AR1Q8NGP9 310 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 LINC01560Q8TB33 94 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 AP3S1Q92572 193 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 TFGQ92734 400 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 HGDQ93099 445 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 UBE2FQ969M7 185 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 SLC25A46Q96AG3 418 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ULK4Q96C45 1275 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 DIRAS2Q96HU8 199 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 MRGPRX2Q96LB1 330 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 KCNJ15Q99712 375 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 AARSD1Q9BTE6 412 aaKnown RBP5.9□□□□□ -1.46
HDAC6-210ENST00000441703 REG4Q9BYZ8 158 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 GSX2Q9BZM3 304 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PPP1R3EQ9H7J1 279 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 REEP1Q9H902 201 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 HHATLQ9HCP6 504 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ABCB9Q9NP78 766 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ZFP64Q9NPA5 681 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 PCDHB16Q9NRJ7 776 aa5.9□□□□□ -1.46
HDAC6-210ENST00000441703 ZNF226Q9NYT6 803 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms