RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 C17orf47Q8NEP4 570 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ASB15Q8WXK1 588 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OSTF1Q92882 214 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 UBE2FQ969M7 185 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TMIGD2Q96BF3 282 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OMA1Q96E52 524 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TSC22D3Q99576 134 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RBM38Q9H0Z9 239 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 DUSP21Q9H596 190 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 LRFN1Q9P244 771 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RSL24D1Q9UHA3 163 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 YARS2Q9Y2Z4 477 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CDH10Q9Y6N8 788 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 EXPH5Q8NEV8 1989 aa13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 HELZ2Q9BYK8 2649 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FASNP49327 2511 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 A0A0B4J2E0 115 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 A0A1B0GX12 115 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 EFCAB10A6NFE3 127 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 UNC119BA6NIH7 251 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SLC25A12O75746 678 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 MT-ND2P03891 347 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 IGFBP1P08833 259 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GABRB1P18505 474 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PTNP21246 168 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RBM34P42696 430 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CYB561P49447 251 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CCR4P51679 360 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 NUDT6P53370 316 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SH3BGRP55822 239 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SNRPGP62308 76 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PLAURQ03405 335 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PMS2P3Q13401 168 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 KLHL26Q53HC5 615 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ALG10BQ5I7T1 473 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SLC27A4Q6P1M0 643 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 IL20RBQ6UXL0 311 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 MDGA2Q7Z553 956 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CLVS1Q8IUQ0 354 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CCDC103Q8IW40 242 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 STX19Q8N4C7 294 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CISD2Q8N5K1 135 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 IQCF1Q8N6M8 205 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CLDN22Q8N7P3 220 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GATSQ8NAP1 163 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR52L1Q8NGH7 329 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR8J1Q8NGP2 316 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR4C3Q8NH37 302 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FANK1Q8TC84 345 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PHOSPHO1Q8TCT1 267 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SGCDQ92629 289 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ADOQ96SZ5 270 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PRSS27Q9BQR3 290 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 DSN1Q9H410 356 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 EGLN3Q9H6Z9 239 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TVP23BQ9NYZ1 205 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CEPT1Q9Y6K0 416 aa13.24□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SHANK1Q9Y566 2161 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 A0A0G2JMM0 328 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 A0A1W2PPB8 328 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 A0A1W2PRS3 328 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 KIR3DP1A8MWS1 328 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 G3V3Y1 287 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 KPNA4O00629 521 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ZNF264O43296 627 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 LYPD3O95274 346 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 NTN1O95631 604 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FADS2O95864 444 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TP53P04637 393 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 HTR1AP08908 422 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ENDOUP21128 410 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TBXA2RP21731 343 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ADH7P40394 386 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ACAA2P42765 397 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PCYT1AP49585 367 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 LSM11P83369 360 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TLE1Q04724 770 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 NDUFAF6Q330K2 333 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RPL13AP3Q6NVV1 102 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ULK3Q6PHR2 472 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ZNF620Q6ZNG0 422 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PRSS48Q7RTY5 328 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 KIF18BQ86Y91 864 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 LSMEM1Q8N8F7 131 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR5M3Q8NGP4 307 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PFN4Q8NHR9 129 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SLC22A8Q8TCC7 542 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FCGR1BQ92637 280 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RORBQ92753 470 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 MUL1Q969V5 352 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TP53INP1Q96A56 240 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SCMH1Q96GD3 660 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PLEKHA8Q96JA3 519 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 C5orf34Q96MH7 638 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 IL4I1Q96RQ9 567 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms