RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 ZNF563Q8TA94 476 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 BCAS4Q8TDM0 211 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 PHF10Q8WUB8 498 aaKnown RBP6.71□□□□□ -1.33
COPS3-203ENST00000439936 RND1Q92730 232 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 NSL1Q96IY1 281 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 MRGPRX4Q96LA9 322 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 TRIB1Q96RU8 372 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 SPATA5L1Q9BVQ7 753 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 CALHM2Q9HA72 323 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 ACER3Q9NUN7 267 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 TAGLN3Q9UI15 199 aa6.71□□□□□ -1.33
COPS3-203ENST00000439936 INTS1Q8N201 2190 aaKnown RBP6.71□□□□□ -1.33
COPS3-203ENST00000439936 UBR5O95071 2799 aaPredicted RBP6.71□□□□□ -1.34
COPS3-203ENST00000439936 DOPEY2Q9Y3R5 2298 aa6.71□□□□□ -1.34
COPS3-203ENST00000439936 TENM4Q6N022 2769 aa6.71□□□□□ -1.34
COPS3-203ENST00000439936 CFAP73A6NFT4 308 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 CD8B2A6NJW9 211 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 FAAHO00519 579 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 NME4O00746 187 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 SERPINB7O75635 380 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 T-ENOLP0DO92 83 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ZNF17P17021 662 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 POU3F2P20265 443 aaPredicted RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 SHC1P29353 583 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 CEACAM8P31997 349 aaPredicted RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 PCGF2P35227 344 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 PTGER4P35408 488 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 APOBEC1P41238 236 aaKnown RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 SLC6A8P48029 635 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 NUDT2P50583 147 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 SMSP52788 366 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 DLX5P56178 289 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 PSME3P61289 254 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 HOXC5Q00444 222 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 LIPEQ05469 1076 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 MERTKQ12866 999 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 VEZF1Q14119 521 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 KRT72Q14CN4 511 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 CDSNQ15517 529 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 TMEM176BQ3YBM2 270 aaPredicted RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 ACSF3Q4G176 576 aaPredicted RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 RNF220Q5VTB9 566 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 DHRS4L2Q6PKH6 230 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 PLEKHM3Q6ZWE6 761 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 CCDC80Q76M96 950 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 CHMP1BQ7LBR1 199 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ZNF550Q7Z398 422 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 PATL1Q86TB9 770 aaKnown RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 GGNQ86UU5 652 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 COMTD1Q86VU5 262 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ARMC8Q8IUR7 673 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 CCDC71Q8IV32 467 aaPredicted RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 SLC30A8Q8IWU4 369 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 MICU2Q8IYU8 434 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ATP6V1C2Q8NEY4 427 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 TNIP2Q8NFZ5 429 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ITLN2Q8WWU7 325 aaPredicted RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 TMEM234Q8WY98 164 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ST8SIA1Q92185 356 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 SMPDL3BQ92485 455 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 OSTF1Q92882 214 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 WFDC6Q9BQY6 131 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ARMC7Q9H6L4 198 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 CACYBPQ9HB71 228 aaKnown RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 CTPS2Q9NRF8 586 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 RNF6Q9Y252 685 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 ANGPT4Q9Y264 503 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 AP3M1Q9Y2T2 418 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 GCN1Q92616 2671 aaKnown RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 ICE1Q9Y2F5 2266 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 HCFC1P51610 2035 aa6.7□□□□□ -1.34
COPS3-203ENST00000439936 SPTBN1Q01082 2364 aaKnown RBP6.7□□□□□ -1.34
COPS3-203ENST00000439936 A0A0G2JNJ9 132 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 ELOVL7A1L3X0 281 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 MBD3L4A6NDZ8 208 aaPredicted RBP6.69□□□□□ -1.34
COPS3-203ENST00000439936 MBD3L3A6NE82 208 aaPredicted RBP6.69□□□□□ -1.34
COPS3-203ENST00000439936 PRORSD1PA6NEY8 169 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 MBD3L5A6NJ08 208 aaPredicted RBP6.69□□□□□ -1.34
COPS3-203ENST00000439936 TRIM64CA6NLI5 447 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 CLCA1A8K7I4 914 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 B2RBV5 119 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 H0Y3Z8 333 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 NDUFAB1O14561 156 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 ADAMDEC1O15204 470 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 SEC14L5O43304 696 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 FRS3O43559 492 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 CXCL13O43927 109 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 TPST2O60704 377 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 TGM6O95932 706 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 LGI1O95970 557 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 OPN1SWP03999 348 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 CCNA2P20248 432 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 AGAP20933 346 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 TACR3P29371 465 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 PRKAR1BP31321 381 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 KDELR2P33947 212 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 SFTPDP35247 375 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 TIMP3P35625 211 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 SLC1A3P43003 542 aa6.69□□□□□ -1.34
COPS3-203ENST00000439936 KCNJ5P48544 419 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms