RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 SLC25A38Q96DW6 304 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 LDAHQ9H6V9 325 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 SCAMP1O15126 338 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 SMAD9O15198 467 aaKnown RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 PPP1R3DO95685 299 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 SAGP10523 405 aaPredicted RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 RPS11P62280 158 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 SLC7A9P82251 487 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 REEP5Q00765 189 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 MAPK14Q16539 360 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 HYAL4Q2M3T9 481 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 METTL11BQ5VVY1 283 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 DCAF12L2Q5VW00 463 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 GLDNQ6ZMI3 551 aaPredicted RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 OR10Z1Q8NGY1 313 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 EXOSC3Q9NQT5 275 aaKnown RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 FBXO34Q9NWN3 711 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 CLDND1Q9NY35 253 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 NPFFR2Q9Y5X5 522 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 SYT5O00445 386 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 NDUFA2O43678 99 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 ATP1B1P05026 303 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 BMP7P18075 431 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 NT5EP21589 574 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 NRG3P56975 720 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 PLA2G7Q13093 441 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 MLC1Q15049 377 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 CSRP2Q16527 193 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 OR7E24Q6IFN5 339 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 FRRS1Q6ZNA5 592 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 CACUL1Q86Y37 369 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 OR4N5Q8IXE1 308 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 FAM98AQ8NCA5 519 aaKnown RBP12.5□□□□□ -0.41
PCNX3-202ENST00000439247 OR52L1Q8NGH7 329 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 STK35Q8TDR2 534 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 HS6ST2Q96MM7 605 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 CD180Q99467 661 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 ANKRD19PQ9H560 264 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 KLHL28Q9NXS3 571 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF443Q9Y2A4 671 aaPredicted RBP12.5□□□□□ -0.41
PCNX3-202ENST00000439247 OR2M5A3KFT3 312 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 PCDH8O95206 1070 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 FGF2P09038 288 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 VSIG10L2P0DP72 767 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 GRPRP30550 384 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 S100A11P31949 105 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF136P52737 540 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 CTAG1AP78358 180 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 SLC9A5Q14940 896 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF613Q6PF04 617 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 THEM6Q8WUY1 208 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 NUS1Q96E22 293 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 ELP4Q96EB1 424 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 PELI1Q96FA3 418 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 LGR4Q9BXB1 951 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 NOX4Q9NPH5 578 aa12.5□□□□□ -0.41
PCNX3-202ENST00000439247 A0A1B0GUH1 482 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 PYCARD-AS1I3L0S3 204 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 PIN1P1O15428 100 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 RLN2P04090 185 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 MAT2AP31153 395 aaKnown RBP12.49□□□□□ -0.41
PCNX3-202ENST00000439247 BCL6P41182 706 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 FNTBP49356 437 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 SEC61A1P61619 476 aaKnown RBP12.49□□□□□ -0.41
PCNX3-202ENST00000439247 DEFA5Q01523 94 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 SHEQ5VZ18 495 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 DCUN1D3Q8IWE4 304 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 ZNRF4Q8WWF5 429 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 MRPS24Q96EL2 167 aaKnown RBP12.49□□□□□ -0.41
PCNX3-202ENST00000439247 NPAS1Q99742 590 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 EVA1AQ9H8M9 152 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 WNT6Q9Y6F9 365 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 TRIOO75962 3097 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
PCNX3-202ENST00000439247 GSTZ1O43708 216 aaPredicted RBP12.49□□□□□ -0.41
PCNX3-202ENST00000439247 RP2O75695 350 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 C6P13671 934 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF35P13682 527 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 TCEA2Q15560 299 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 RAB30Q15771 203 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 HSD17B12Q53GQ0 312 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 PAQR7Q86WK9 346 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 HDDC3Q8N4P3 179 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 LSM14AQ8ND56 463 aaKnown RBP12.49□□□□□ -0.41
PCNX3-202ENST00000439247 LRRC3BQ96PB8 259 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 ABRACLQ9P1F3 81 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 GNG8Q9UK08 70 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 MOKQ9UQ07 419 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 COL6A3P12111 3177 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 CACNA1CQ13936 2221 aa12.49□□□□□ -0.41
PCNX3-202ENST00000439247 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.48□□□□□ -0.41
PCNX3-202ENST00000439247 KRBOX1C9JBD0 128 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms