RNA–Protein interactions for RNA: ENST00000434318.1

MMP11-203, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 1,165 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-203ENST00000434318 PIGWQ7Z7B1 504 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 ZNF611Q8N823 705 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 OR52P1PQ8NH57 321 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 FBXO27Q8NI29 283 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 BBS10Q8TAM1 723 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 WDR60Q8WVS4 1066 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 ELAC2Q9BQ52 826 aaKnown RBP12.37□□□□□ -0.43
MMP11-203ENST00000434318 NANOGQ9H9S0 305 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 FANCFQ9NPI8 374 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 STOML1Q9UBI4 398 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 IFT52Q9Y366 437 aa12.37□□□□□ -0.43
MMP11-203ENST00000434318 A0A0J9YW62 118 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 A8MV72 311 aaPredicted RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 H3BML4 177 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 GMFGO60234 142 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 GCM2O75603 506 aaPredicted RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 IL7RP16871 459 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 TCEA1P23193 301 aaKnown RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 SLC6A8P48029 635 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 CDK6Q00534 326 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 SRYQ05066 204 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 RBBP4Q09028 425 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.43
MMP11-203ENST00000434318 NFYCQ13952 458 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 CAPRIN1Q14444 709 aaKnown RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 RPS26P11Q5JNZ5 115 aaPredicted RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 REEP3Q6NUK4 255 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 ZNF836Q6ZNA1 936 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 SERPINA11Q86U17 422 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 CALHM3Q86XJ0 350 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 VRK2Q86Y07 508 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 ZNF440Q8IYI8 595 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 GCNT2Q8N0V5 402 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 OR8J3Q8NGG0 315 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 RP9Q8TA86 221 aaKnown RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 GTPBP3Q969Y2 492 aaKnown RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 LRRC58Q96CX6 371 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 SPATA9Q9BWV2 254 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 REG4Q9BYZ8 158 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 ADAM19Q9H013 955 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 TMEM160Q9NX00 188 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 PAQR5Q9NXK6 330 aaPredicted RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 ZNF443Q9Y2A4 671 aaPredicted RBP12.36□□□□□ -0.43
MMP11-203ENST00000434318 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
MMP11-203ENST00000434318 LOC100653049A0A140TA62 436 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 TMEM247A6NEH6 219 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 RNF223E7ERA6 249 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 SMNDC1O75940 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
MMP11-203ENST00000434318 KRT34O76011 436 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 NUDT14O95848 222 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 PABPC4LP0CB38 370 aaKnown RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 CD8BP10966 210 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 LOXP28300 417 aaPredicted RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 SHC1P29353 583 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 APOBEC1P41238 236 aaKnown RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 RPS4XP62701 263 aaKnown RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 EPS8Q12929 822 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 CYLC2Q14093 348 aaPredicted RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 LARS2Q15031 903 aaKnown RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 LIN52Q52LA3 116 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 REP15Q6BDI9 236 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 C8orf82Q6P1X6 216 aaPredicted RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 ZNF704Q6ZNC4 412 aaPredicted RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 CHMP1BQ7LBR1 199 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 P4HA3Q7Z4N8 544 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 HMGN2P46Q86SG4 172 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 MTDHQ86UE4 582 aaKnown RBP12.35□□□□□ -0.43
MMP11-203ENST00000434318 SNX32Q86XE0 403 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 ADGRG3Q86Y34 549 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 TREML1Q86YW5 311 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 LILRA2Q8N149 483 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 CLIP4Q8N3C7 705 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 TMEM234Q8WY98 164 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 KLHL15Q96M94 604 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 RNF122Q9H9V4 155 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 YAE1D1Q9NRH1 226 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 RLIMQ9NVW2 624 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 ARMCX1Q9P291 453 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 USF3Q68DE3 2245 aa12.35□□□□□ -0.43
MMP11-203ENST00000434318 HS3ST1O14792 307 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 MRASO14807 208 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 FKBP2P26885 142 aaKnown RBP12.34□□□□□ -0.43
MMP11-203ENST00000434318 PRKAR1BP31321 381 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 SLC1A3P43003 542 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 KCNJ5P48544 419 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 MAP2K6P52564 334 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 MTPNP58546 118 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 RPS3AP61247 264 aaKnown RBP12.34□□□□□ -0.43
MMP11-203ENST00000434318 GNGT1P63211 74 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 SELENBP1Q13228 472 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 SCARB2Q14108 478 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 DHRS4L2Q6PKH6 230 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 ANKS4BQ8N8V4 417 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 C11orf65Q8NCR3 313 aa12.34□□□□□ -0.43
MMP11-203ENST00000434318 HIPK4Q8NE63 616 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms