RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMEM239Q8WW34 195 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 KCNE4Q8WWG9 221 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 DIO2Q92813 273 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FGF13Q92913 245 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 F2RL3Q96RI0 385 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 UBQLN3Q9H347 655 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SPATA2Q9UM82 520 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 B8ZZF3 427 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TO15178 435 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR2F2O95006 317 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TBX18O95935 607 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LCATP04180 440 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SMIM18P0DKX4 95 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CPEP16870 476 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TACR3P29371 465 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR2F1Q13607 317 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 GRB7Q14451 532 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 P4HA3Q7Z4N8 544 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 B3GNT8Q7Z7M8 397 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CCDC71LQ8N9Z2 235 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 GPBAR1Q8TDU6 330 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MSLNLQ96KJ4 702 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SPRTNQ9H040 489 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SOHLH2Q9NX45 425 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ALKBH4Q9NXW9 302 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CGGBP1Q9UFW8 167 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 HEPACAM2A8MVW5 462 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ANKRD65E5RJM6 399 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RECKO95980 971 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ITPKBP27987 946 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 GLP1RP43220 463 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PITX1P78337 314 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF57Q68EA5 555 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 HEPHL1Q6MZM0 1159 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OTOP2Q7RTS6 562 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FBXO27Q8NI29 283 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF563Q8TA94 476 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 THAP6Q8TBB0 222 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CACNG6Q9BXT2 260 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 APMAPQ9HDC9 416 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FZD3Q9NPG1 666 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 KLHL1Q9NR64 748 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SPTY2D1-AS1A0A0U1RR47 76 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 C4orf47A7E2U8 309 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ALG1L2C9J202 215 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 AIFM1O95831 613 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MPZP25189 248 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RPS13P62277 151 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RPS27AP62979 156 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 UBA52P62987 128 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SELENBP1Q13228 472 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 KIAA0040Q15053 153 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RAB11BQ15907 218 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SOWAHCQ53LP3 525 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ANKRD54Q6NXT1 300 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ANKRD16Q6P6B7 361 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RNF111Q6ZNA4 994 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 B3GNT7Q8NFL0 401 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR51A2Q8NGJ7 313 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TSSK2Q96PF2 358 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ALG8Q9BVK2 526 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MTG2Q9H4K7 406 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 GAREM1Q9H706 876 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MYOZ1Q9NP98 299 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ACER3Q9NUN7 267 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 CXXC1Q9P0U4 656 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 KCNIP3Q9Y2W7 256 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FBXO7Q9Y3I1 522 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MID1O15344 667 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 HSPA12AO43301 675 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LRP3O75074 770 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 AQP8O94778 261 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 KDM4BO94953 1096 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 HOXD4P09016 255 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 HOXB1P14653 301 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PTPN6P29350 595 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OMPP47874 163 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 RPS23P62266 143 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 E2F1Q01094 437 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM196Q5HYL7 178 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PRSS36Q5K4E3 855 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 MSRB3Q8IXL7 192 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR2AJ1Q8NGZ0 328 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 NFKBIDQ8NI38 313 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PIGMQ9H3S5 423 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LAMP5Q9UJQ1 280 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LHX6Q9UPM6 363 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 FLNBO75369 2602 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 OR2B3O76000 313 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 LRATO95237 230 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ETFAP13804 333 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 SELEP16581 610 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 NFYAP23511 347 aaPredicted RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 APEX1P27695 318 aaKnown RBP3.49□□□□□ -1.85
SHPRH-205ENST00000433355 PREPP48147 710 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 DNASE1L1P49184 302 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 TPTEP56180 551 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 IHHQ14623 411 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 AGBL4Q5VU57 503 aa3.49□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF322Q6U7Q0 402 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms