RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 FAM181AQ8N9Y4 354 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 FAM71CQ8NEG0 241 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 OR1L3Q8NH93 324 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 MCCC2Q9HCC0 563 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 TOR4AQ9NXH8 423 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 ZNF337Q9Y3M9 751 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 PCDHGB7Q9Y5F8 929 aa11.76□□□□□ -0.53
DDX56-204ENST00000431640 RP1P56715 2156 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 GTPBP1O00178 669 aaKnown RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 ADAM11O75078 769 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 PPP1R3DO95685 299 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 APOA1P02647 267 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 MT-ND5P03915 603 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 UBL4AP11441 157 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 PNLIPP16233 465 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SLC6A8P48029 635 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 FABP5Q01469 135 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 LGALS3BPQ08380 585 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 CSRP2Q16527 193 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 TBC1D25Q3MII6 688 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ZNF362Q5T0B9 420 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 LCN1P1Q5VSP4 162 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 AGAP7PQ5VUJ5 663 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 HLA-DQA1Q5Y7H0 255 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 STEAP3Q658P3 488 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ASCL5Q7RTU5 278 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 NUP54Q7Z3B4 507 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 KLBQ86Z14 1044 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SNX29P2Q8IUI4 249 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SIRT6Q8N6T7 355 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 POC5Q8NA72 575 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ATP6V1C2Q8NEY4 427 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 OR14A16Q8NHC5 309 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ERMAPQ96PL5 475 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 DPYSL5Q9BPU6 564 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 TMEM43Q9BTV4 400 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 DUSP23Q9BVJ7 150 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ALG8Q9BVK2 526 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 OR51V1Q9H2C8 321 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 TPK1Q9H3S4 243 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SYNDIG1Q9H7V2 258 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 MED20Q9H944 212 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 C12orf10Q9HB07 376 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 TRIM36Q9NQ86 728 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ZNF229Q9UJW7 825 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 NOX1Q9Y5S8 564 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ZNF292O60281 2723 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ASCC3Q8N3C0 2202 aaKnown RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 C2orf92A0A1B0GVN3 265 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 TCRBV16S1A1N1A0A5B0 115 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 CCDC182A6NF36 153 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 OR6C76A6NM76 312 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ARPC3O15145 178 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ZNF264O43296 627 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 HYAL3O43820 417 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 OR7A10O76100 309 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 IGKV3-11P04433 115 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 NGFRP08138 427 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SBK2P0C263 348 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SLC2A5P22732 501 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 F8A1P23610 371 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SDC2P34741 201 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 GRK6P43250 576 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SLC16A1P53985 500 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 MXD1Q05195 221 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 HNRNPA0Q13151 305 aaKnown RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 SQSTM1Q13501 440 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 DNASE1L3Q13609 305 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 FHL1Q13642 323 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 CRMP1Q14194 572 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 NR0B2Q15466 257 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 NNATQ16517 81 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ZNF791Q3KP31 576 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SNAP47Q5SQN1 464 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 DDI2Q5TDH0 399 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 FNDC7Q5VTL7 733 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ARIH2OSQ8N7S6 290 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 Q8N9G6 341 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 OR5M3Q8NGP4 307 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 SETD6Q8TBK2 473 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 PHOSPHO1Q8TCT1 267 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ZNF721Q8TF20 911 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 LIPHQ8WWY8 451 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 ADIPOR1Q96A54 375 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 C3orf49Q96BT1 292 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 EFHD2Q96C19 240 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 CLIP3Q96DZ5 547 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 MRPL48Q96GC5 212 aaKnown RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 TM9SF2Q99805 663 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 OR8D2Q9GZM6 311 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 NDEL1Q9GZM8 345 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 LAT2Q9GZY6 243 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 NCDNQ9UBB6 729 aa11.75□□□□□ -0.53
DDX56-204ENST00000431640 PLEKHB1Q9UF11 243 aaPredicted RBP11.75□□□□□ -0.53
DDX56-204ENST00000431640 CHRNA9Q9UGM1 479 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms