RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 AGTR1P30556 359 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 GNRHRP30968 328 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 CFHR2P36980 270 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ARF6P62330 175 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 NKX6-1P78426 367 aaPredicted RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 SRSF6Q13247 344 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OLIG2Q13516 323 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 RBM39Q14498 530 aaKnown RBP4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ZSWIM7Q19AV6 140 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ISXQ2M1V0 245 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ZNF181Q2M3W8 571 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TMEM41BQ5BJD5 291 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 EMC4Q5J8M3 183 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PABPC1L2AQ5JQF8 200 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 NXNL2Q5VZ03 156 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ALKAL2Q6UX46 152 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OVCH1Q7RTY7 1134 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PHYKPLQ8IUZ5 450 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 VRK3Q8IV63 474 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 NAXDQ8IW45 347 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 VGLL2Q8N8G2 317 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 C4orf32Q8N8J7 132 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR2G2Q8NGZ5 317 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 FAM45AQ8TCE6 357 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ST8SIA1Q92185 356 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 TIMD4Q96H15 378 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR2M2Q96R28 347 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ABCG5Q9H222 651 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PORCNQ9H237 461 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 AUNIPQ9H7T9 357 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 NANOGQ9H9S0 305 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 SCUBE2Q9NQ36 999 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 OR6C3Q9NZP0 311 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 COL20A1Q9P218 1284 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 PEMTQ9UBM1 199 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 MADDQ8WXG6 1647 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 ABCA8O94911 1581 aa4.98□□□□□ -1.61
PTPN4-203ENST00000430976 A0A0U1RRA0 63 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 TVP23AA6NH52 213 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 LIPT2A6NK58 231 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 K7EN84 100 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 DNASE2O00115 360 aaPredicted RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RFXAPO00287 272 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 NRG2O14511 850 aaPredicted RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 B3GAT3O94766 335 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 FGF19O95750 216 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 ICAM1P05362 532 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 NUDT17P0C025 328 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 NBEAP1P0C6P0 100 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 EPHA3P29320 983 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 APOBEC3AP31941 199 aaPredicted RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 SLC16A1P53985 500 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 PIGPP57054 158 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CRADDP78560 199 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CTBSQ01459 385 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 SEMG2Q02383 582 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 SF3A2Q15428 464 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 C5orf64Q2M2E5 130 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CLLU1Q5K131 121 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 LHX8Q68G74 356 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 TANGO2Q6ICL3 276 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 DRAM2Q6UX65 266 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 BHLHA15Q7RTS1 189 aaPredicted RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 OR56A1Q8NGH5 318 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 OR51A7Q8NH64 312 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RXFP4Q8TDU9 374 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RAB8BQ92930 207 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CRAMP1Q96RY5 1269 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RBM24Q9BX46 236 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 GPR174Q9BXC1 333 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 ACTRT3Q9BYD9 372 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 OR2J1Q9GZK6 312 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 SPATC1LQ9H0A9 340 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RETNQ9HD89 108 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CNOT2Q9NZN8 540 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 ABI3Q9P2A4 366 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 SUSD2Q9UGT4 822 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 APOBEC3BQ9UH17 382 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 PRPF19Q9UMS4 504 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 MRPS18CQ9Y3D5 142 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 KLF18A0A0U1RQI7 1052 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RPS10-NUDT3A0A1W2PQS6 291 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 MTHFD2P13995 350 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RBMS1P29558 406 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 NTSR1P30989 418 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 APLNRP35414 380 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 RPS10P46783 165 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 FABP6P51161 128 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 DAP3P51398 398 aaKnown RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 BAXQ07812 192 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 PDE7AQ13946 482 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 MAPK14Q16539 360 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CEACAM21Q3KPI0 293 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 DUX4L9Q6RFH8 374 aaPredicted RBP4.97□□□□□ -1.61
PTPN4-203ENST00000430976 MAMDC4Q6UXC1 1216 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CD300LGQ6UXG3 332 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 NRARPQ7Z6K4 114 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 CADM4Q8NFZ8 388 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 OR4E2Q8NGC2 313 aa4.97□□□□□ -1.61
PTPN4-203ENST00000430976 OR2A12Q8NGT7 310 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms