RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 ING1Q9UK53 422 aaPredicted RBP16.69■□□□□ 0.26
LIN28AP1-201ENST00000429574 IGKV3D-15A0A087WSY6 115 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 PRAMEF27A3QJZ7 478 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 AP3D1O14617 1153 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZNF208O43345 1280 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 BCAS1O75363 584 aaPredicted RBP16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 HOXB4P17483 251 aaPredicted RBP16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 NCF2P19878 526 aaPredicted RBP16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 IGHV1-2P23083 117 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 POLR2JP52435 117 aaKnown RBP16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 DSTNP60981 165 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 BSPH1Q075Z2 132 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZSWIM7Q19AV6 140 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 SLC9B1Q4ZJI4 515 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 LIN52Q52LA3 116 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 ABLIM2Q6H8Q1 611 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 KLHL17Q6TDP4 642 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 CASP12Q6UXS9 341 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 DEPDC4Q8N2C3 294 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 CADM2Q8N3J6 435 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 OR52P1PQ8NH57 321 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZNF75CPQ92670 426 aaPredicted RBP16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 COX4I2Q96KJ9 171 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 RAD21L1Q9H4I0 556 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 TMBIM4Q9HC24 238 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 OSGIN1Q9UJX0 560 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 POU2F3Q9UKI9 436 aa16.68■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZFHX3Q15911 3703 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 NF1P21359 2839 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 TRIM64A6NGJ6 449 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 TRIM64BA6NI03 449 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 RAD51DO75771 328 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 BCHEP06276 602 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 FAPQ12884 760 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZNF672Q499Z4 452 aaPredicted RBP16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 MSANTD1Q6ZTZ1 278 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 CCDC103Q8IW40 242 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 RADILQ96JH8 1075 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 TAPBPLQ9BX59 468 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 TPT1P8Q9HAU6 139 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZNF701Q9NV72 531 aaPredicted RBP16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 SLC9A8Q9Y2E8 581 aa16.67■□□□□ 0.26
LIN28AP1-201ENST00000429574 TMEM72A0PK05 275 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 FAM234BA2RU67 622 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 FAAHO00519 579 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 LY6G6DO95868 133 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 C1QCP02747 245 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 GPIP06744 558 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 ETFAP13804 333 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 PAX1P15863 534 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 IDUAP35475 653 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 PPP2R2BQ00005 443 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 TGFBR3Q03167 851 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 EPS8Q12929 822 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 OR7E24Q6IFN5 339 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 TMEM108Q6UXF1 575 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZNF433Q8N7K0 673 aaPredicted RBP16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 KBTBD8Q8NFY9 601 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 OR52N5Q8NH56 324 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 TAS2R16Q9NYV7 291 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 CISD1Q9NZ45 108 aaKnown RBP16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 PRDM4Q9UKN5 801 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 MGAT4BQ9UQ53 548 aa16.66■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZNF469Q96JG9 3925 aaPredicted RBP16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 DPRXA6NFQ7 191 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 OR5H1A6NKK0 313 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZNF716A6NP11 495 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 C5orf58C9J3I9 102 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 ABCD4O14678 606 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 POLR3GO15318 223 aaPredicted RBP16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 KRT33AO76009 404 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 ZCCHC18P0CG32 403 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 COX5AP20674 150 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 RPS4Y1P22090 263 aaKnown RBP16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 SLC16A1P53985 500 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 VEZF1Q14119 521 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 ETFDHQ16134 617 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 OTUD3Q5T2D3 398 aaPredicted RBP16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 TMEM225Q6GV28 225 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 WBP2NLQ6ICG8 309 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 VRK2Q86Y07 508 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 CIARTQ8N365 385 aaPredicted RBP16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 LRRC8CQ8TDW0 803 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 DYDC1Q8WWB3 177 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 MAELQ96JY0 434 aaKnown RBP16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 HS6ST2Q96MM7 605 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 SDR39U1Q9NRG7 319 aaPredicted RBP16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 RLIMQ9NVW2 624 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 IFT52Q9Y366 437 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 USH1CQ9Y6N9 552 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 ROS1P08922 2347 aa16.65■□□□□ 0.26
LIN28AP1-201ENST00000429574 NIPBLQ6KC79 2804 aaeCLIP16.64■□□□□ 0.25
LIN28AP1-201ENST00000429574 A0A0G2JPF8 293 aa16.64■□□□□ 0.25
LIN28AP1-201ENST00000429574 CDHR4A6H8M9 788 aa16.64■□□□□ 0.25
LIN28AP1-201ENST00000429574 HNRNPCL2B2RXH8 293 aa16.64■□□□□ 0.25
LIN28AP1-201ENST00000429574 HNRNPCL3B7ZW38 293 aa16.64■□□□□ 0.25
LIN28AP1-201ENST00000429574 KLF11O14901 512 aa16.64■□□□□ 0.25
LIN28AP1-201ENST00000429574 HNRNPCL1O60812 293 aaKnown RBP16.64■□□□□ 0.25
LIN28AP1-201ENST00000429574 PGM3O95394 542 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms