RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 IL23RQ5VWK5 629 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 SLC46A3Q7Z3Q1 461 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 GRINAQ7Z429 371 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 C6orf120Q7Z4R8 191 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 HOMEZQ8IX15 550 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 IFT20Q8IY31 132 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 ANKS4BQ8N8V4 417 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 FNDC5Q8NAU1 212 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 VRK1Q99986 396 aaPredicted RBP16■□□□□ 0.15
UPK3BP1-201ENST00000428678 DUSP26Q9BV47 211 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 ZNF350Q9GZX5 532 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 EXD2Q9NVH0 621 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 PARPBPQ9NWS1 579 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 SLC35A3Q9Y2D2 325 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 SLC9A8Q9Y2E8 581 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 FLVCR1Q9Y5Y0 555 aa16■□□□□ 0.15
UPK3BP1-201ENST00000428678 RNF103-CHMP3A0A140T963 221 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 LOC390937A0A1W2PQ73 354 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 SLU7O95391 586 aaKnown RBP15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 WNT11O96014 354 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 FGF4P08620 206 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 KRT4P19013 534 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 CDH2P19022 906 aaPredicted RBP15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 PRPS1L1P21108 318 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 FKBP2P26885 142 aaKnown RBP15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 PGM1P36871 562 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 CLK1P49759 484 aaKnown RBP15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 PRPS1P60891 318 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 CR1LQ2VPA4 569 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 PGS1Q32NB8 556 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 XKR7Q5GH72 579 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 C6orf136Q5SQH8 315 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 TSPO2Q5TGU0 170 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 C4orf33Q8N1A6 199 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 FAM71CQ8NEG0 241 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 TXLNGYQ9BZA5 131 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 TMEM181Q9P2C4 612 aa15.99■□□□□ 0.15
UPK3BP1-201ENST00000428678 KLF11O14901 512 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 SHBGP04278 402 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 ZNF23P17027 643 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 MPGP29372 298 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 ATAD3BQ5T9A4 648 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 EMBQ6PCB8 327 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 SPATA19Q7Z5L4 167 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 LSRQ86X29 649 aaPredicted RBP15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 ADGRG3Q86Y34 549 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 CLECL1Q8IZS7 167 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 C3orf30Q96M34 536 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 KCNS3Q9BQ31 491 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 NAA11Q9BSU3 229 aaPredicted RBP15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 BPESC1Q9GZL8 116 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 OR51I1Q9H343 314 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 MYOZ1Q9NP98 299 aaPredicted RBP15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 TRAPPC4Q9Y296 219 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 WDR45Q9Y484 360 aa15.98■□□□□ 0.15
UPK3BP1-201ENST00000428678 TCF21O43680 179 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 NPHS1O60500 1241 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 EIF1BO60739 113 aaKnown RBP15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 SERPINF1P36955 418 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 IDH2P48735 452 aaKnown RBP15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 SLC35A1P78382 337 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 H3F3AP84243 136 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 HIKESHIQ53FT3 197 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 HMGN2P46Q86SG4 172 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 RIMKLAQ8IXN7 391 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 ARFGAP2Q8N6H7 521 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 ZNF540Q8NDQ6 660 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 XAGE5Q8WWM1 108 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 C1orf159Q96HA4 380 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 SOX7Q9BT81 388 aa15.97■□□□□ 0.15
UPK3BP1-201ENST00000428678 TMED7-TICAM2A0A0A6YYA0 188 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 SKAP2O75563 359 aaPredicted RBP15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 OR12D1P0DN82 309 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 ALDH3A1P30838 453 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 SRP14P37108 136 aaKnown RBP15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 RUNX1T1Q06455 604 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 SLC17A1Q14916 467 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 C1QTNF12Q5T7M4 302 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 OR4F3Q6IEY1 312 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 TYW3Q6IPR3 259 aaKnown RBP15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 TNFAIP8L2Q6P589 184 aaPredicted RBP15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 GSPT2Q8IYD1 628 aaKnown RBP15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 RFLNBQ8N5W9 214 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 RAB8BQ92930 207 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 DDIT4LQ96D03 193 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 MECRQ9BV79 373 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 PCDHGB4Q9UN71 923 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 TMED7Q9Y3B3 224 aa15.96■□□□□ 0.15
UPK3BP1-201ENST00000428678 MGAM2Q2M2H8 2515 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 IGHV1-18A0A0C4DH31 117 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 LRP5LA4QPB2 252 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 CLDN24A6NM45 220 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 AGR2O95994 175 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 G6PDP11413 515 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 IMPDH2P12268 514 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 HTR3AP46098 478 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 VHLLQ6RSH7 139 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 FRRS1Q6ZNA5 592 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 OR4A15Q8NGL6 344 aa15.95■□□□□ 0.14
UPK3BP1-201ENST00000428678 EPS8L3Q8TE67 593 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms