RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SLC19A3Q9BZV2 496 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 KLHL4Q9C0H6 718 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 OR11A1Q9GZK7 315 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 ADAM19Q9H013 955 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 SLC25A18Q9H1K4 315 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 PRDM4Q9UKN5 801 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 NPIPA1Q9UND3 350 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 TMEM5Q9Y2B1 443 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 SLC6A5Q9Y345 797 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 LIPGQ9Y5X9 500 aa7.15□□□□□ -1.26
HMGA1P4-201ENST00000428643 EXPH5Q8NEV8 1989 aa7.15□□□□□ -1.27
HMGA1P4-201ENST00000428643 TRAV36DV7A0A075B6V5 113 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 A0A087WUU8 490 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 TRGV5A0A0B4J1U4 118 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ARRDC5A6NEK1 342 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 EI24O14681 340 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNF208O43345 1280 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 SAGP10523 405 aaPredicted RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 PRKACGP22612 351 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 GTF2E2P29084 291 aaKnown RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 SHC1P29353 583 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 IDUAP35475 653 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 RPS5P46782 204 aaKnown RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 B3GALT5-AS1P59052 145 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 LSM11P83369 360 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 IL1RL1Q01638 556 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 KLRB1Q12918 225 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 MICAQ29983 383 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 TMEM44Q2T9K0 475 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 TMEM176BQ3YBM2 270 aaPredicted RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 CMPK2Q5EBM0 449 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 C1orf140Q5VVS0 124 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 RPUSD3Q6P087 351 aaKnown RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 PGBD2Q6P3X8 592 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 C5orf46Q6UWT4 87 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 LINC00114Q6XXX2 140 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZBTB49Q6ZSB9 765 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 TRILQ7L0X0 811 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ADGRG3Q86Y34 549 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 UBQLNLQ8IYU4 475 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 CDK20Q8IZL9 346 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 LINC00471Q8N535 108 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 Q8NA96 180 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 GTPBP3Q969Y2 492 aaKnown RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 KTI12Q96EK9 354 aaPredicted RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 SGTBQ96EQ0 304 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 FAM46AQ96IP4 442 aaKnown RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 KLHL15Q96M94 604 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNF426Q9BUY5 554 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 GABARAPL1Q9H0R8 117 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 VCXQ9H320 206 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 VCX3BQ9H321 246 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZDHHC11Q9H8X9 412 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNF556Q9HAH1 456 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 C20orf141Q9NUB4 165 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 MED13Q9UHV7 2174 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 MRPS18CQ9Y3D5 142 aaKnown RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 ORC6Q9Y5N6 252 aa7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 MAGED1Q9Y5V3 778 aaPredicted RBP7.14□□□□□ -1.27
HMGA1P4-201ENST00000428643 EFCAB9A8MZ26 197 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 LINC01387J3KSC0 135 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 EIF1AYO14602 144 aaKnown RBP7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 CASQ2O14958 399 aaPredicted RBP7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 HCN1O60741 890 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR7A10O76100 309 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 CH25HO95992 272 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 ACTL6AO96019 429 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 ADAP00813 363 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 ANXA8P13928 327 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 POU2F1P14859 743 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 CBLP22681 906 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 CHMP24386 653 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 IGFBP5P24593 272 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 PTDSS1P48651 473 aaKnown RBP7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 STARP49675 285 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 MAP2K6P52564 334 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 HMGA2P52926 109 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 GFRA1P56159 465 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 CTBP2P56545 445 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 CLDN20P56880 219 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 NUP107P57740 925 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 RAC1P63000 192 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 SRYQ05066 204 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 EGR4Q05215 589 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 MYBPHQ13203 477 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 DAG1Q14118 895 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 OR7A5Q15622 319 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 PRR30Q53SZ7 412 aaPredicted RBP7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 C1QL3Q5VWW1 255 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 ZNF770Q6IQ21 691 aaPredicted RBP7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 PPP4R4Q6NUP7 873 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 FAHD1Q6P587 224 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 NANOGNBQ7Z5D8 188 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 SIAH3Q8IW03 269 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 RNF113BQ8IZP6 322 aaKnown RBP7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 CISD2Q8N5K1 135 aaKnown RBP7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 NEIL3Q8TAT5 605 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 FANK1Q8TC84 345 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 STK35Q8TDR2 534 aa7.13□□□□□ -1.27
HMGA1P4-201ENST00000428643 NRG4Q8WWG1 115 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms