RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ARFIP2P53365 341 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CASP9P55211 416 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 SLC35A1P78382 337 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 MERTKQ12866 999 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 POU4F3Q15319 338 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 ADRM1Q16186 407 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 TMEM201Q5SNT2 666 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 ERICH5Q6P6B1 374 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF474Q6S9Z5 364 aaPredicted RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 SPNS3Q6ZMD2 512 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CCDC80Q76M96 950 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 BTLAQ7Z6A9 289 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 DHDDSQ86SQ9 333 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 PATL1Q86TB9 770 aaKnown RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 GCNT2Q8N0V5 402 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 GABRG1Q8N1C3 465 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 DEPDC4Q8N2C3 294 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 TMCO5AQ8N6Q1 288 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 STEAP2Q8NFT2 490 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 RP9Q8TA86 221 aaKnown RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF563Q8TA94 476 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 CNOT9Q92600 299 aaKnown RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 PSD2Q9BQI7 771 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 TRIM2Q9C040 744 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 PCDHAC1Q9H158 963 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 MOV10Q9HCE1 1003 aaKnown RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 SAR1AQ9NR31 198 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 PARPBPQ9NWS1 579 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 PGPEP1Q9NXJ5 209 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 KLHL28Q9NXS3 571 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 OSGIN1Q9UJX0 560 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 ANGPT4Q9Y264 503 aa8.15□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF443Q9Y2A4 671 aaPredicted RBP8.15□□□□□ -1.1
SMC1A-203ENST00000428014 SH3D21A4FU49 640 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM229AB2RXF0 380 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 C9JVG2 144 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 H0YC42 278 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 NR5A2O00482 541 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 SMAD9O15198 467 aaKnown RBP8.14□□□□□ -1.11
SMC1A-203ENST00000428014 ADAM11O75078 769 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 AVPP01185 164 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 GPIP06744 558 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 POU2F1P14859 743 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 UQCRC1P31930 480 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 OR3A2P47893 321 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 IDH2P48735 452 aaKnown RBP8.14□□□□□ -1.11
SMC1A-203ENST00000428014 CCR4P51679 360 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 NR1H2P55055 460 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 TPD52P55327 224 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-203ENST00000428014 MYBPHQ13203 477 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 GTDC1Q4AE62 458 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF311Q5JNZ3 666 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 VWA1Q6PCB0 445 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 TFAP2EQ6VUC0 442 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 HACD2Q6Y1H2 254 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 DNAJC14Q6Y2X3 702 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF836Q6ZNA1 936 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 Q6ZT83 130 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 GALNT5Q7Z7M9 940 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 ADPRHL1Q8NDY3 354 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 MFSD8Q8NHS3 518 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 RFWD2Q8NHY2 731 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 ROBO4Q8WZ75 1007 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM45BQ96B21 275 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 AURKBQ96GD4 344 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-203ENST00000428014 MARK4Q96L34 752 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 NPAS1Q99742 590 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 NAA11Q9BSU3 229 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-203ENST00000428014 TMEM120AQ9BXJ8 343 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 CXXC4Q9H2H0 198 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 NGBQ9NPG2 151 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 CTPS2Q9NRF8 586 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 FGFR1OP2Q9NVK5 253 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 GID8Q9NWU2 228 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 CRIM1Q9NZV1 1036 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 MALT1Q9UDY8 824 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 DCTN4Q9UJW0 460 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 ING1Q9UK53 422 aaPredicted RBP8.14□□□□□ -1.11
SMC1A-203ENST00000428014 CHST2Q9Y4C5 530 aa8.14□□□□□ -1.11
SMC1A-203ENST00000428014 AKAP6Q13023 2319 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 TMED7-TICAM2A0A0A6YYA0 188 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF716A6NP11 495 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 CASKO14936 926 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 LILRA1O75019 489 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 MFN2O95140 757 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 IFNA14P01570 189 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 COX5AP20674 150 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 TACR3P29371 465 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 PRDX6P30041 224 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 PCGF2P35227 344 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 SFTPDP35247 375 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 RASGEF1BQ0VAM2 473 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 KLF10Q13118 480 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 ITGADQ13349 1161 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 SCARB2Q14108 478 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 TESK1Q15569 626 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 HIST2H2BCQ6DN03 193 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 ADAM5Q6NVV9 412 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 ZNF613Q6PF04 617 aa8.13□□□□□ -1.11
SMC1A-203ENST00000428014 ULK3Q6PHR2 472 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms