RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MYEF2Q9P2K5 600 aaKnown RBP10.44□□□□□ -0.74
SEC61A1-202ENST00000424880 ACAD8Q9UKU7 415 aa10.44□□□□□ -0.74
SEC61A1-202ENST00000424880 EFCAB7A8K855 629 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SCAMP1O15126 338 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 ADAM12O43184 909 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 FADS1O60427 444 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 FCMRO60667 390 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 ACTL6AO96019 429 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SPI1P17947 270 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 MPGP29372 298 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 MAT2AP31153 395 aaKnown RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SGCAQ16586 387 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 PGGHGQ32M88 737 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 OR51A7Q8NH64 312 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 FCAMRQ8WWV6 532 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 VOPP1Q96AW1 172 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 NEURL3Q96EH8 262 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 PGLYRP3Q96LB9 341 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 NDC1Q9BTX1 674 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 CAMK2AQ9UQM7 478 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 AGPAT2O15120 278 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 GREM1O60565 184 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 OR2A4O95047 310 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 VNN2O95498 520 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 CSN2P05814 226 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 S100A9P06702 114 aaKnown RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 CST5P28325 142 aaPredicted RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 OMPP47874 163 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SMIM11AP58511 58 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 DCDP81605 110 aaKnown RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 PLEKHN1Q494U1 663 aaPredicted RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 ACER2Q5QJU3 275 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 TMEM69Q5SWH9 247 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 ZNF697Q5TEC3 545 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 DPPA4Q7L190 304 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 OR2W3Q7Z3T1 314 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SYNPRQ8TBG9 265 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 CD99L2Q8TCZ2 262 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SMPDL3AQ92484 453 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 OR2A7Q96R45 310 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 UBQLN3Q9H347 655 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 TREM1Q9NP99 234 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SIRT3Q9NTG7 399 aaPredicted RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 WDFY3Q8IZQ1 3526 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 PLPP1O14494 284 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 KRT33AO76009 404 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 THY1P04216 161 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 ST6GAL1P15907 406 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 GATMP50440 423 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 CAPZA1P52907 286 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 TSPAN31Q12999 210 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 PDE7AQ13946 482 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 PCGF3Q3KNV8 242 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 ZNF311Q5JNZ3 666 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 TMEM17Q86X19 198 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SLC44A3Q8N4M1 653 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 ZSCAN1Q8NBB4 408 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 SP7Q8TDD2 431 aaPredicted RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 TCEAL4Q96EI5 215 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 CPEB1Q9BZB8 566 aaKnown RBP10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 C20orf141Q9NUB4 165 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 TAS2R5Q9NYW4 299 aa10.43□□□□□ -0.74
SEC61A1-202ENST00000424880 MYOFQ9NZM1 2061 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 UBE2QL1A1L167 161 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 TMEM218A2RU14 115 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 LRRC72A6NJI9 287 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 HMSDA8MTL9 139 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 WRBO00258 174 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 IMPA2O14732 288 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PRAF2O60831 178 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 AQP8O94778 261 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 CLTBP09497 229 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 ZGLP1P0C6A0 271 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 IL9P15248 144 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 CDK2P24941 298 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 RGS19P49795 217 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PSMD4P55036 377 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SNTB1Q13884 538 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 CBFBQ13951 182 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PRPF38BQ5VTL8 546 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 DHRS7BQ6IAN0 325 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 FAM109BQ6ICB4 259 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 ZC3H14Q6PJT7 736 aaKnown RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 TSSK4Q6SA08 328 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 FAM71CQ8NEG0 241 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 OR2T33Q8NG76 320 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 OR2AK2Q8NG84 335 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 OR51S1Q8NGJ8 323 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 NUBPLQ8TB37 319 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 ZMYND19Q96E35 227 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PRRC1Q96M27 445 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SLC25A32Q9H2D1 315 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 CHRDQ9H2X0 955 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SEBOXQ9HB31 216 aaPredicted RBP10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 KLHL9Q9P2J3 617 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 B4GALT6Q9UBX8 382 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 SCN3AQ9NY46 2000 aa10.42□□□□□ -0.74
SEC61A1-202ENST00000424880 TRAV27A0A087WT01 109 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms