RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 C10orf67Q8IYJ2 551 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 FAM89BQ8N5H3 189 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF738Q8NE65 137 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR2AK2Q8NG84 335 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR4F6Q8NGB9 312 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR8K1Q8NGG5 319 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR52I1Q8NGK6 324 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR6Q1Q8NGQ2 317 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR2L8Q8NGY9 312 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 HMGCLL1Q8TB92 370 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 WFIKKN2Q8TEU8 576 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 PHF10Q8WUB8 498 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 BADQ92934 168 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SLC35C1Q96A29 364 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ISOC2Q96AB3 205 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 S100PBPQ96BU1 408 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SDSLQ96GA7 329 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 RITA1Q96K30 269 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 PPP1R36Q96LQ0 422 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR5B2Q96R09 309 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 GFM1Q96RP9 751 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 CLCC1Q96S66 551 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 CNN2Q99439 309 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SLC6A7Q99884 636 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 TM2D2Q9BX73 214 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 SLC25A51Q9H1U9 297 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 OR51B6Q9H340 312 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 WDR55Q9H6Y2 383 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 AAMDCQ9H7C9 122 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 GPN2Q9H9Y4 310 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 POPDC2Q9HBU9 364 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 MOV10Q9HCE1 1003 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 FGF21Q9NSA1 209 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 NXT1Q9UKK6 140 aaKnown RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 CLEC4EQ9ULY5 219 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 FAF1Q9UNN5 650 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-205ENST00000424674 FGD5Q6ZNL6 1462 aa3.26□□□□□ -1.89
SF3B1-205ENST00000424674 JCADQ9P266 1359 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 A0A1W2PPC1 479 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 TCRBV5S1A1TA0A578 114 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PRSS37A4D1T9 235 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 OR5K3A6NET4 321 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 MYMKA6NI61 221 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 FAM74A7A6NL05 159 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 G3V4G9 280 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CLDN34H7C241 214 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CCL24O00175 119 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GOSR2O14653 212 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 IMPA2O14732 288 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CASKO14936 926 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 EPHB6O15197 1021 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 AQP9O43315 295 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZIC3O60481 467 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PSIP1O75475 530 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 BRI3O95415 125 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 NADKO95544 446 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 AP2A1O95782 977 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 F10P00742 488 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 IGHG3P01860 377 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 P04436 131 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 KLK1P06870 262 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GIMD1P0DJR0 217 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GATA1P15976 413 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 IVDP26440 423 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 HMGB2P26583 209 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 HLA-DMAP28067 261 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GTF2H1P32780 548 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CEACAM3P40198 252 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ID1P41134 155 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 RGRP47804 291 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 DNASE1L1P49184 302 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GNG10P50151 68 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 RAP1GDS1P52306 607 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 RAB4BP61018 213 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ID2Q02363 134 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SCRN3Q0VDG4 424 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CDC20Q12834 499 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CNTN1Q12860 1018 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 FAM189A2Q15884 450 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 DUOXA1Q1HG43 343 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SLC25A52Q3SY17 297 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF672Q499Z4 452 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ACCSLQ4AC99 568 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SLC9C1Q4G0N8 1177 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 FAM74A3Q4VXF1 159 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SLC35D3Q5M8T2 416 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 MARCH8Q5T0T0 291 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 OR2G6Q5TZ20 316 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 BSPRYQ5W0U4 402 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ACSM5Q6NUN0 579 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 RHBDF2Q6PJF5 856 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SPESP1Q6UW49 350 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PRSS57Q6UWY2 283 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CERS6Q6ZMG9 384 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF621Q6ZSS3 439 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 LANCL3Q6ZV70 420 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 RFPL4BQ6ZWI9 263 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ABHD13Q7L211 337 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms