RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SRMP19623 302 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 MAPK3P27361 379 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 IRF4Q15306 451 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 GPR68Q15743 365 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 TCTE1Q5JU00 501 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 SLC6A19Q695T7 634 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 CTRB2Q6GPI1 263 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 FAM198BQ6UWH4 519 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 C3P1Q6ZMU1 363 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 OVCH2Q7RTZ1 564 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 NAXDQ8IW45 347 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 SLC35F2Q8IXU6 374 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 SIX5Q8N196 739 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 FCAMRQ8WWV6 532 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 RSC1A1Q92681 617 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 CLIP3Q96DZ5 547 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 MS4A3Q96HJ5 214 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 CCNL2Q96S94 520 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 DDOQ99489 341 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 REG4Q9BYZ8 158 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 RSPH9Q9H1X1 276 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 C6orf106Q9H6K1 298 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 METTL17Q9H7H0 456 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 MCCC2Q9HCC0 563 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 MBNL1Q9NR56 388 aaKnown RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 KCNE5Q9UJ90 142 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 ING1Q9UK53 422 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 DAPP1Q9UN19 280 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 TRPM6Q9BX84 2022 aa14.02□□□□□ -0.17
C9orf3-204ENST00000424143 MFSD2BA6NFX1 497 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 KRBOX1C9JBD0 128 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 ACOT7O00154 380 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 AGRPO00253 132 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 GALR3O60755 368 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 NKX2-2O95096 273 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 NDUFB2O95178 105 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PPP1R3DO95685 299 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 CFDP00746 253 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 TFP02787 698 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SLC35G6P0C7Q6 338 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 CFPP27918 469 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SELENOPP49908 381 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PPP2CBP62714 309 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PPP2CAP67775 309 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 MESP2Q0VG99 397 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 MANEAQ5SRI9 462 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 ZNF626Q68DY1 528 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SSX6Q7RTT6 188 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 EIF4E3Q8N5X7 224 aaKnown RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 COX18Q8N8Q8 333 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 S100A16Q96FQ6 103 aaKnown RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PEX11GQ96HA9 241 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 MACROD1Q9BQ69 325 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 AIFM2Q9BRQ8 373 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 NMNAT2Q9BZQ4 307 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 IL21RQ9HBE5 538 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 OBP2AQ9NY56 170 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SPHK1Q9NYA1 384 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 NCDNQ9UBB6 729 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 DPP7Q9UHL4 492 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 MRPS7Q9Y2R9 242 aaKnown RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 ZNF281Q9Y2X9 895 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 MRPS23Q9Y3D9 190 aaKnown RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PTPRSQ13332 1948 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 TRBV2A0A0J9YWF9 115 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 CENPVL1A0A0U1RR11 272 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 A0A1W2PRG6 482 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PPM1BO75688 479 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 NDUFB6O95139 128 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 ADH1BP00325 375 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 MRPL3P09001 348 aaKnown RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 HOXD4P09016 255 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 ZNF888P0CJ79 500 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 HOXB3P14651 431 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 C5AR1P21730 350 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PTH2RP49190 550 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 VSX2P58304 361 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 TSPAN5P62079 268 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 POU6F2P78424 691 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 ENPP2Q13822 863 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PON3Q15166 354 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 PDGFRLQ15198 375 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 MPPED2Q15777 294 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 RGS7BPQ6MZT1 257 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 ZC3H14Q6PJT7 736 aaKnown RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 RPTNQ6XPR3 784 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 DPY19L2P2Q6ZN68 376 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 Q6ZTK2 550 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 GRASPQ7Z6J2 395 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SLC35F3Q8IY50 421 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 DTX3Q8N9I9 347 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 THEM6Q8WUY1 208 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 HAVCR1Q96D42 359 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SLC25A38Q96DW6 304 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 RSPRY1Q96DX4 576 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SFXN2Q96NB2 322 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 TNFRSF13CQ96RJ3 184 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 DPYSL5Q9BPU6 564 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 RBCK1Q9BYM8 510 aa14.01□□□□□ -0.17
C9orf3-204ENST00000424143 SYNPO2LQ9H987 977 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms