RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 SURF4O15260 269 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 SIGLEC6O43699 453 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 CSTAP01040 98 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 RAB40BQ12829 278 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 C1DQ13901 141 aaKnown RBP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 NSDHLQ15738 373 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 ALG10BQ5I7T1 473 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 PRAMEF17Q5VTA0 474 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 ULK3Q6PHR2 472 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 WDR88Q6ZMY6 472 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 DTX3Q8N9I9 347 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 SLC2A12Q8TD20 617 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 GRHL3Q8TE85 626 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 TSLPQ969D9 159 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 PMEPA1Q969W9 287 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 BPIFA2Q96DR5 249 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 ARSGQ96EG1 525 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 TRMT61AQ96FX7 289 aaKnown RBP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 CCDC120Q96HB5 630 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 OR8D2Q9GZM6 311 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 EXOSC4Q9NPD3 245 aaKnown RBP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 UBQLN4Q9NRR5 601 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 TP53BP1Q12888 1972 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 VPS13AQ96RL7 3174 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 A0A1B0GWA3 101 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 FRG2CA6NGY1 282 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 KDM4EB2RXH2 506 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 CFIP05156 583 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 HPGDP15428 266 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 LCN1P31025 176 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 CRYBB2P43320 205 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 FAPQ12884 760 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 MLLT11Q13015 90 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 ZNF528Q3MIS6 628 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 RHBDD2Q6NTF9 364 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 XKRXQ6PP77 449 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 CCDC190Q86UF4 302 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 CEP76Q8TAP6 659 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 FANK1Q8TC84 345 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 GIMAP1Q8WWP7 306 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 LCORQ96JN0 433 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-202ENST00000424011 DPH1Q9BZG8 443 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 KCNN2Q9H2S1 579 aa15.2■□□□□ 0.02
CMTM3-202ENST00000424011 TNRC6BQ9UPQ9 1833 aaKnown RBP15.19■□□□□ 0.02
CMTM3-202ENST00000424011 CABIN1Q9Y6J0 2220 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 IL33O95760 270 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 IGKV3-11P04433 115 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 PSKH1P11801 424 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 ADH7P40394 386 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 RFX2P48378 723 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 KLHL26Q53HC5 615 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 C3orf38Q5JPI3 329 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 C1orf189Q5VU69 101 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 LIPKQ5VXJ0 399 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 SHFQ7M4L6 423 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 SLC43A2Q8N370 569 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 ZBTB44Q8NCP5 570 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 OR4C3Q8NH37 302 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 PFN4Q8NHR9 129 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 OR52D1Q9H346 318 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 GAREM1Q9H706 876 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 FGF20Q9NP95 211 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-202ENST00000424011 FSCN3Q9NQT6 498 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 NDUFB11Q9NX14 153 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 EIF3KQ9UBQ5 218 aaKnown RBP15.19■□□□□ 0.02
CMTM3-202ENST00000424011 COPS7AQ9UBW8 275 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 TRAPPC4Q9Y296 219 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 DMDP11532 3685 aa15.19■□□□□ 0.02
CMTM3-202ENST00000424011 A8MUA0 341 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 DDAH2O95865 285 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 MYL12AP19105 171 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 MTNR1AP48039 350 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 GPR143P51810 404 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 EFR3AQ14156 821 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 VWA2Q5GFL6 755 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 OR2G6Q5TZ20 316 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 ZNF574Q6ZN55 896 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-202ENST00000424011 PHC2Q8IXK0 858 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-202ENST00000424011 OR4M1Q8NGD0 313 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 LHFPL5Q8TAF8 219 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 ZNF721Q8TF20 911 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 DNAJA4Q8WW22 397 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-202ENST00000424011 SAMD8Q96LT4 415 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 ZNF426Q9BUY5 554 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 TGIF2Q9GZN2 237 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 LIN7BQ9HAP6 207 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 FLRT3Q9NZU0 649 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 NUFIP1Q9UHK0 495 aaKnown RBP15.18■□□□□ 0.02
CMTM3-202ENST00000424011 TEKT2Q9UIF3 430 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 MKL2Q9ULH7 1088 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 ATXN7L1Q9ULK2 861 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-202ENST00000424011 LY6G6EA0A0G2JKS1 128 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 SCDO00767 359 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 HCN1O60741 890 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 SLC2A10O95528 541 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 SP9P0CG40 484 aa15.18■□□□□ 0.02
CMTM3-202ENST00000424011 SAGP10523 405 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms