RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 NKX6-2Q9C056 277 aaPredicted RBP11.54□□□□□ -0.56
CLCN4-203ENST00000421085 C1QBP02746 253 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 NUDT1P36639 197 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 RPS19P39019 145 aaKnown RBP11.54□□□□□ -0.56
CLCN4-203ENST00000421085 SLC6A8P48029 635 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 OR7E24Q6IFN5 339 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 SCD5Q86SK9 330 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 FIBINQ8TAL6 211 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 SEC22CQ9BRL7 303 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 TMEM269A0A1B0GVZ9 245 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 PRSS44E7EML9 344 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 PTGESO14684 152 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 APBB3O95704 486 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 IQCF3P0C7M6 154 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 OMGP23515 440 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 CST9LP1Q5W188 147 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 ZNF534Q76KX8 674 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 LRRTM3Q86VH5 581 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 CMIPQ8IY22 773 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 OR10R2Q8NGX6 335 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 RADILQ96JH8 1075 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 NIPSNAP1Q9BPW8 284 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
CLCN4-203ENST00000421085 GPR34Q9UPC5 381 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 IGKV6-21A0A0C4DH24 114 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 NFKBIEO00221 500 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 GJB3O75712 270 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 SFTPDP35247 375 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 PDLIM7Q9NR12 457 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 CLEC2DQ9UHP7 191 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 KCPQ6ZWJ8 1503 aa11.54□□□□□ -0.56
CLCN4-203ENST00000421085 MSTNO14793 375 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 GPR137BO60478 399 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 B3GALNT1O75752 331 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ZDHHC11BP0C7U3 371 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 OR8G3PP0DMU2 310 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 CNR1P21554 472 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 OR7A5Q15622 319 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 PTRH1Q86Y79 214 aaKnown RBP11.53□□□□□ -0.56
CLCN4-203ENST00000421085 UBE2FQ969M7 185 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 RTP3Q9BQQ7 232 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 FAM227AF5H4B4 570 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ADAM10O14672 748 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 CA12O43570 354 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 GPRIN2O60269 458 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 TAS2R46P59540 309 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 SMIM14Q96QK8 99 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 CLDND1Q9NY35 253 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ZNF623O75123 536 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 DBHP09172 617 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 TAS2R30P59541 319 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 SOHLH1Q5JUK2 328 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ZNF808Q8N4W9 903 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-203ENST00000421085 TTC9BQ8N6N2 239 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 C14orf79Q96F83 325 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 SLC6A14Q9UN76 642 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ANKRD12Q6UB98 2062 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 TCRBV21S2A2A0A5A6 115 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 TACR1P25103 407 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 SIRPAP78324 504 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 RTP2Q5QGT7 225 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ZNF761Q86XN6 746 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-203ENST00000421085 OR52R1Q8NGF1 315 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ST8SIA4Q92187 359 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 UBXN10Q96LJ8 280 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 OR5B2Q96R09 309 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 XRN1Q8IZH2 1706 aaKnown RBP11.53□□□□□ -0.56
CLCN4-203ENST00000421085 EFCAB7A8K855 629 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ACTL6BO94805 426 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 BMP1P13497 986 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 ETV6P41212 452 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 EXOSC7Q15024 291 aaKnown RBP11.53□□□□□ -0.56
CLCN4-203ENST00000421085 STK11Q15831 433 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 RTL6Q6ICC9 239 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 DVL3Q92997 716 aaPredicted RBP11.53□□□□□ -0.56
CLCN4-203ENST00000421085 TUBB1Q9H4B7 451 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 RNF167Q9H6Y7 350 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 MED17Q9NVC6 651 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 SLC45A1Q9Y2W3 748 aa11.53□□□□□ -0.56
CLCN4-203ENST00000421085 TRABD2BA6NFA1 517 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 KDM4EB2RXH2 506 aaPredicted RBP11.52□□□□□ -0.56
CLCN4-203ENST00000421085 LILRB3O75022 631 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 KCNK5O95279 499 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 OPRD1P41143 372 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 ILKQ13418 452 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 SFRP5Q5T4F7 317 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 TMEM25Q86YD3 366 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 PELI3Q8N2H9 469 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 FRMD1Q8N878 549 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 SGK494L7N484 410 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 PPP1R2P9O14990 202 aa11.52□□□□□ -0.56
CLCN4-203ENST00000421085 MAGEB4O15481 346 aaPredicted RBP11.52□□□□□ -0.56
CLCN4-203ENST00000421085 TRAPPC2P0DI81 140 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms