RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 FAM69AQ5T7M9 428 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 TMEM236Q5W0B7 351 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 PRICKLE2Q7Z3G6 844 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 PIP4P1Q86T03 277 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 PROKR2Q8NFJ6 384 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 LRR1Q96L50 414 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 MRGPRX4Q96LA9 322 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 LMF1Q96S06 567 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 FANCFQ9NPI8 374 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 DNAJC27Q9NZQ0 273 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 SLC6A5Q9Y345 797 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 MUC6Q6W4X9 2439 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 PCNX2A6NKB5 2137 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 ZFHX2Q9C0A1 2572 aaPredicted RBP6.77□□□□□ -1.33
BDNF-209ENST00000420794 DSPPQ9NZW4 1301 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 A0A0B4J2E0 115 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 A0A1B0GX12 115 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 MT-ATP6P00846 226 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 ZNF823P16415 610 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 ADH7P40394 386 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 ZNF117Q03924 483 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 ITGADQ13349 1161 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 OR7A5Q15622 319 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 LCN10Q6JVE6 187 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 C3orf33Q6P1S2 294 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 C1orf94Q6P1W5 598 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 KLHL17Q6TDP4 642 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 CXXC5Q7LFL8 322 aaKnown RBP6.77□□□□□ -1.33
BDNF-209ENST00000420794 GPR155Q7Z3F1 870 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 P4HA3Q7Z4N8 544 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 ZER1Q7Z7L7 766 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 TMEM179BQ7Z7N9 219 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 MEX3DQ86XN8 651 aaKnown RBP6.77□□□□□ -1.33
BDNF-209ENST00000420794 MEIOBQ8N635 442 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 APCDD1LQ8NCL9 501 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 CNIH3Q8TBE1 160 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 FCGR1BQ92637 280 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 VNN3Q9NY84 501 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 IL20RAQ9UHF4 553 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 NEUROG3Q9Y4Z2 214 aa6.77□□□□□ -1.33
BDNF-209ENST00000420794 SPTBN2O15020 2390 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TSPAN2O60636 221 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 DLGAP3O95886 979 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 ONECUT2O95948 504 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 IGKV1D-16P01601 117 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 POU3F2P20265 443 aaPredicted RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 ELK4P28324 431 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 POLR2IP36954 125 aaKnown RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 MLF1P58340 268 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 MVKQ03426 396 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TMEM176BQ3YBM2 270 aaPredicted RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 ZNF691Q5VV52 312 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 C1orf140Q5VVS0 124 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 FAHD1Q6P587 224 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TIPARPQ7Z3E1 657 aaKnown RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 IQCF1Q8N6M8 205 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 SEMA4CQ9C0C4 833 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 FAM192AQ9GZU8 254 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 GALNT9Q9HCQ5 603 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TNFRSF10DQ9UBN6 386 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 GTF2A1LQ9UNN4 478 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 CEP192Q8TEP8 1941 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TRAV27A0A087WT01 109 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 A0A087WUJ7 227 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 LOC102723996A0A087X1L8 192 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 LOC101059948A0A1B0GTJ6 334 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 SMIM31A0A1B0GVY4 71 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 SLC22A31A6NKX4 558 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 FBXO45P0C2W1 286 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 ZNF43P17038 809 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 HLCSP50747 726 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 MLLT10P55197 1068 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 GPR85P60893 370 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TUBA4AP68366 448 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 CDK5R2Q13319 367 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TAF13Q15543 124 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 PGGHGQ32M88 737 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 GPR139Q6DWJ6 353 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 ASCL5Q7RTU5 278 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 PPP1R32Q7Z5V6 425 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 SLC22A16Q86VW1 577 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 LSMEM1Q8N8F7 131 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 OR13C2Q8NGS9 318 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 OR6N1Q8NGY5 312 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 NKD1Q969G9 470 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 INIPQ9NRY2 104 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 COMMD3-BMI1R4GMX3 469 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 BDP1A6H8Y1 2624 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 SNRNP200O75643 2136 aaKnown RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 MKRN2OSH3BPM6 223 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 TFECO14948 347 aaPredicted RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 OR7A10O76100 309 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 PPP1R3DO95685 299 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 SERPINB10P48595 397 aa6.76□□□□□ -1.33
BDNF-209ENST00000420794 ZNF385CQ66K41 422 aaPredicted RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 CLVS1Q8IUQ0 354 aaPredicted RBP6.76□□□□□ -1.33
BDNF-209ENST00000420794 UEVLDQ8IX04 471 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms