RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 H3F3AP84243 136 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 FOXF2Q12947 444 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 MYBPHQ13203 477 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.34
PTPN18-204ENST00000420717 SGCBQ16585 318 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 ZNF613Q6PF04 617 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 PLXDC2Q6UX71 529 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 SLC43A2Q8N370 569 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 OR52E4Q8NGH9 312 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 STK35Q8TDR2 534 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 SLC38A4Q969I6 547 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 ARL5BQ96KC2 179 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 TACO1Q9BSH4 297 aaKnown RBP12.9□□□□□ -0.34
PTPN18-204ENST00000420717 POLR2J2Q9GZM3 115 aaKnown RBP12.9□□□□□ -0.34
PTPN18-204ENST00000420717 ENKD1Q9H0I2 346 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.34
PTPN18-204ENST00000420717 PIF1Q9H611 641 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 BCO1Q9HAY6 547 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 KCNJ16Q9NPI9 418 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 PACSIN3Q9UKS6 424 aa12.9□□□□□ -0.34
PTPN18-204ENST00000420717 CENPEQ02224 2701 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 IGKV3D-15A0A087WSY6 115 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 A1L4Q6 167 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 M0R3H8 397 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CXCR6O00574 342 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CYTIPO60759 359 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CGAP01215 116 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 OPN1LWP04000 364 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CD8BP10966 210 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 GGT1P19440 569 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 BMP5P22003 454 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CALB2P22676 271 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CXCR1P25024 350 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 KIR2DL2P43627 348 aaPredicted RBP12.89□□□□□ -0.35
PTPN18-204ENST00000420717 SLC16A1P53985 500 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 NCALDP61601 193 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 HOXC5Q00444 222 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 PDK3Q15120 406 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CYBRD1Q53TN4 286 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 ULK3Q6PHR2 472 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 C16orf89Q6UX73 402 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 FCRLAQ7L513 359 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 FAM214BQ7L5A3 538 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 GCNT2Q8N0V5 402 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CADM2Q8N3J6 435 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 OR6T1Q8NGN1 323 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 SLC26A7Q8TE54 656 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 INTS12Q96CB8 462 aaKnown RBP12.89□□□□□ -0.35
PTPN18-204ENST00000420717 OR5B2Q96R09 309 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 KCTD14Q9BQ13 255 aaPredicted RBP12.89□□□□□ -0.35
PTPN18-204ENST00000420717 OR11A1Q9GZK7 315 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 NPDC1Q9NQX5 325 aaPredicted RBP12.89□□□□□ -0.35
PTPN18-204ENST00000420717 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 GMPR2Q9P2T1 348 aaKnown RBP12.89□□□□□ -0.35
PTPN18-204ENST00000420717 CD300AQ9UGN4 299 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 FOXD3Q9UJU5 478 aaPredicted RBP12.89□□□□□ -0.35
PTPN18-204ENST00000420717 SLC9A8Q9Y2E8 581 aa12.89□□□□□ -0.35
PTPN18-204ENST00000420717 A0A087WUJ7 227 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 ZC3H12DA2A288 527 aaKnown RBP12.88□□□□□ -0.35
PTPN18-204ENST00000420717 FAM90A27PA6NNH2 459 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 PRSS44E7EML9 344 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 SULT2B1O00204 365 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 MSTNO14793 375 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 CHP2O43745 196 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 EIF1BO60739 113 aaKnown RBP12.88□□□□□ -0.35
PTPN18-204ENST00000420717 LYPD3O95274 346 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 T-ENOLP0DO92 83 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 IMPDH2P12268 514 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
PTPN18-204ENST00000420717 AGTR1P30556 359 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 SELENOWP63302 87 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 EGR4Q05215 589 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 OR1Q1Q15612 314 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 ALG10BQ5I7T1 473 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 SAMD4BQ5PRF9 694 aaKnown RBP12.88□□□□□ -0.35
PTPN18-204ENST00000420717 GTF2IRD2BQ6EKJ0 949 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 LINC00114Q6XXX2 140 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 GTF2IRD2Q86UP8 949 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 ARHGAP24Q8N264 748 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 OR6K3Q8NGY3 331 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 OR6S1Q8NH40 331 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 PROX1Q92786 737 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 STARD4Q96DR4 205 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 SLC47A1Q96FL8 570 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 NSL1Q96IY1 281 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 SPOCK3Q9BQ16 436 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 PSD2Q9BQI7 771 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 TMEM43Q9BTV4 400 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 ZNF426Q9BUY5 554 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 C1orf21Q9H246 121 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 TMEM27Q9HBJ8 222 aa12.88□□□□□ -0.35
PTPN18-204ENST00000420717 ING1Q9UK53 422 aaPredicted RBP12.88□□□□□ -0.35
PTPN18-204ENST00000420717 IGKV1D-42A0A075B6H8 117 aa12.87□□□□□ -0.35
PTPN18-204ENST00000420717 NKX2-6A6NCS4 301 aa12.87□□□□□ -0.35
PTPN18-204ENST00000420717 LIPT2A6NK58 231 aa12.87□□□□□ -0.35
PTPN18-204ENST00000420717 ZNF724A8MTY0 619 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms