RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SLC6A7Q99884 636 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 PATZ1Q9HBE1 687 aaKnown RBP2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 COX16Q9P0S2 106 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 SLCO1B1Q9Y6L6 691 aa2.65□□□□□ -1.99
HMGB1P49-201ENST00000418882 LRP4O75096 1905 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 A6NDX4 124 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 SNAI2O43623 268 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 PRKYO43930 277 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 MOSP00540 346 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 RBMY1CP0DJD4 496 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 RNH1P13489 461 aaKnown RBP2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 TBXA2RP21731 343 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 CCNCP24863 283 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 CCR1P32246 355 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 PRKXP51817 358 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 HSPA2P54652 639 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 SPIBQ01892 262 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 TNFRSF17Q02223 184 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 SYPL1Q16563 259 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 CASC10Q5T4H9 136 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 GPRC6AQ5T6X5 926 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 ATAD3BQ5T9A4 648 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 KIAA1328Q86T90 577 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 NRMQ8IXM6 262 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF786Q8N393 782 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 SVOPLQ8N434 492 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 KIR3DL3Q8N743 410 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 EIF1ADQ8N9N8 165 aaKnown RBP2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 Q8N9W7 124 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 OR13C2Q8NGS9 318 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 BRSK1Q8TDC3 778 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 BLOC1S5Q8TDH9 187 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 OSTF1Q92882 214 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 RNF185Q96GF1 192 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 GAL3ST1Q99999 423 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 GLRX2Q9NS18 164 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 AIG1Q9NVV5 245 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 SIGLEC8Q9NYZ4 499 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 MTRF1LQ9UGC7 380 aaKnown RBP2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 KIF25Q9UIL4 384 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 BTNL2Q9UIR0 455 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF223Q9UK11 482 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 SNX6Q9UNH7 406 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 GSTK1Q9Y2Q3 226 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 TMED5Q9Y3A6 229 aa2.64□□□□□ -1.99
HMGB1P49-201ENST00000418882 CARMIL1Q5VZK9 1371 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 IGKV1D-8A0A087WSZ0 117 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 PPIAL4CA0A0B4J2A2 164 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 IGHV2-70DA0A0C4DH43 119 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 A0A0G2JLM5 398 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 GJE1A6NN92 205 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 HCRTR1O43613 425 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 ECI2O75521 394 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 SNAPINO95295 136 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 LALBAP00709 142 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 MMP1P03956 469 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 PPIAL4GP0DN37 164 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CALCBP10092 127 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CA8P35219 290 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 LEPP41159 167 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 RPS14P62263 151 aaKnown RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CNTN2Q02246 1040 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF763Q0D2J5 394 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CCDC173Q0VFZ6 552 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 MADCAM1Q13477 382 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 DDX39BQ13838 428 aaKnown RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 SLC36A3Q495N2 470 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 KCTD21Q4G0X4 260 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 TMEM41BQ5BJD5 291 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CFAP157Q5JU67 520 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 NCR3LG1Q68D85 454 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 ACOT7LQ6ZUV0 252 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 C16orf62Q7Z3J2 963 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 NKAPP1Q8N9T2 125 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CATSPER1Q8NEC5 780 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 OR10T2Q8NGX3 314 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 PNPT1Q8TCS8 783 aaKnown RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CTNNBL1Q8WYA6 563 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF75CPQ92670 426 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 C12orf66Q96MD2 445 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 FICDQ9BVA6 458 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 POLR2J2Q9GZM3 115 aaKnown RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 POLR2J3Q9H1A7 115 aaKnown RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 RHBGQ9H310 441 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 CRLF2Q9HC73 371 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 ERVW-1Q9UQF0 538 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 FRMPD4Q14CM0 1322 aa2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 PHF3Q92576 2039 aaKnown RBP2.63□□□□□ -1.99
HMGB1P49-201ENST00000418882 ATP10DQ9P241 1426 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 CTAGE15A4D2H0 777 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 ERICH4A6NGS2 130 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 G3V4G9 280 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 K7EQM0 130 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 OR10H3O60404 316 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 DFNA5O60443 496 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 ERLIN1O75477 346 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 LGI1O95970 557 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms