RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DNAJC13O75165 2243 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 C17orf67Q0P5P2 114 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 GPR176Q14439 515 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 HBMQ6B0K9 141 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 LCN8Q6JVE9 175 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ANKRD54Q6NXT1 300 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF529Q6P280 563 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 PIANPQ8IYJ0 282 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF679Q8IYX0 411 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 C1QTNF2Q9BXJ5 285 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SPDEFO95238 335 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ENPP1P22413 925 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 TAS2R31P59538 309 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF674Q2M3X9 581 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 C9orf152Q5JTZ5 239 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 RTL6Q6ICC9 239 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SGK3Q96BR1 496 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 EHFQ9NZC4 300 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MYO5AQ9Y4I1 1855 aaKnown RBP10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MCM3APO60318 1980 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 TMEM189-UBE2V1I3L0A0 370 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MITFO75030 526 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MMP12P39900 470 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 C15orf39Q6ZRI6 1047 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF480Q8WV37 535 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ELOVL3Q9HB03 270 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 AGPAT4Q9NRZ5 378 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 CCL26Q9Y258 94 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 PRSS21Q9Y6M0 314 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SHISA7A6NL88 538 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 TFP02787 698 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 C1SP09871 688 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SLC2A1P11166 492 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 IDH3GP51553 393 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MPEG1Q2M385 716 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 PROX2Q3B8N5 592 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF789Q5FWF6 425 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 COQ5Q5HYK3 327 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 RBMXL3Q8N7X1 1067 aaKnown RBP10.47□□□□□ -0.73
PTCH1-205ENST00000418258 PIGQQ9BRB3 760 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MRI1Q9BV20 369 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SMOXQ9NWM0 555 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SIDT1Q9NXL6 827 aaKnown RBP10.47□□□□□ -0.73
PTCH1-205ENST00000418258 GNG12Q9UBI6 72 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 HHLA2Q9UM44 414 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 F5H5P2 479 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 PRAMEF4O60810 478 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 SEC14L2O76054 403 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 NCS1P62166 190 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 SLC35A1P78382 337 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 MSMO1Q15800 293 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 FXNQ16595 210 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 PDZD9Q8IXQ8 264 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 ASB17Q8WXJ9 295 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 NLKQ9UBE8 527 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 NKX6-3A6NJ46 265 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 FAM183AA6NL82 134 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 DRGXA6NNA5 263 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-205ENST00000418258 CSF1P09603 554 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 AOAHP28039 575 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 ELP2Q6IA86 826 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 ESX1Q8N693 406 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 ADAMTS19Q8TE59 1207 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 MRPL38Q96DV4 380 aaKnown RBP10.46□□□□□ -0.73
PTCH1-205ENST00000418258 TXN2Q99757 166 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 C7orf50Q9BRJ6 194 aaKnown RBP10.46□□□□□ -0.73
PTCH1-205ENST00000418258 PLCXD1Q9NUJ7 323 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 MCRIP1C9JLW8 97 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 SDC1P18827 310 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 RAD52P43351 418 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 CYB561P49447 251 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 FOXA1P55317 472 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 ACSM3Q53FZ2 586 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 OR7E24Q6IFN5 339 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 HEPHL1Q6MZM0 1159 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 FAM198BQ6UWH4 519 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 SERPINA11Q86U17 422 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 PNPLA1Q8N8W4 532 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 OR2A12Q8NGT7 310 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 SLAMF9Q96A28 289 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 PRRT1Q99946 306 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 FUNDC2Q9BWH2 189 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 SAP130Q9H0E3 1048 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 SLC6A17Q9H1V8 727 aa10.46□□□□□ -0.73
PTCH1-205ENST00000418258 DDX31Q9H8H2 851 aaKnown RBP10.46□□□□□ -0.73
PTCH1-205ENST00000418258 NXT1Q9UKK6 140 aaKnown RBP10.46□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF891A8MT65 544 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 APOC3P02656 99 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 ITGB2P05107 769 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 LIPCP11150 499 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 ZNF140P52738 457 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 TNFRSF17Q02223 184 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 MFSD9Q8NBP5 474 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 C3orf58Q8NDZ4 430 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 NT5C3BQ969T7 300 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 THSD1Q9NS62 852 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 DHCR7Q9UBM7 475 aaKnown RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 LRRC37A3O60309 1634 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms