RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 KRT36O76013 467 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 CCNB2O95067 398 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 OR6A2O95222 327 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 SEMG1P04279 462 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 PRB1P04280 392 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 SAGP10523 405 aaPredicted RBP7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF23P17027 643 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 RBM34P42696 430 aaKnown RBP7.63□□□□□ -1.19
TRIM48-201ENST00000417545 MAGEA2P43356 314 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 RPS5P46782 204 aaKnown RBP7.63□□□□□ -1.19
TRIM48-201ENST00000417545 CLK1P49759 484 aaKnown RBP7.63□□□□□ -1.19
TRIM48-201ENST00000417545 GFRA1P56159 465 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 CARD18P57730 90 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 CRYZQ08257 329 aaKnown RBP7.63□□□□□ -1.19
TRIM48-201ENST00000417545 OR7A5Q15622 319 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 C3AR1Q16581 482 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 EXOC3L2Q2M3D2 409 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 C1orf140Q5VVS0 124 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ESPNLQ6ZVH7 1005 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 CD163Q86VB7 1156 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ADGRG3Q86Y34 549 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 P3H2Q8IVL5 708 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 NKAIN4Q8IVV8 208 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 MCEMP1Q8IX19 187 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 LINC00471Q8N535 108 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ICA1LQ8NDH6 482 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 OR2V1Q8NHB1 315 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM255BQ8WV15 326 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ACOT11Q8WXI4 607 aaPredicted RBP7.63□□□□□ -1.19
TRIM48-201ENST00000417545 C7orf34Q96L11 122 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ALPK1Q96QP1 1244 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 KCNK17Q96T54 332 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 NPAS1Q99742 590 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 SLX1AQ9BQ83 275 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 NAA11Q9BSU3 229 aaPredicted RBP7.63□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM43Q9BTV4 400 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ASPNQ9BXN1 380 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 OR11A1Q9GZK7 315 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF556Q9HAH1 456 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 ARMC1Q9NVT9 282 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 SPRR3Q9UBC9 169 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 DNAJB9Q9UBS3 223 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM5Q9Y2B1 443 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 HDGFL3Q9Y3E1 203 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 LOC400499M0QZD8 3231 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 PKD1L2Q7Z442 2459 aa7.63□□□□□ -1.19
TRIM48-201ENST00000417545 TRGV8A0A0C4DH27 118 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 A0A1B0GVC2 190 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 B8ZZF3 427 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 ETV2O00321 342 aaPredicted RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 CXCL13O43927 109 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 NTN1O95631 604 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 PLGP00747 810 aaPredicted RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 FCGR2AP12318 317 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 IFI30P13284 250 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 GABRA1P14867 456 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF708P17019 499 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 IL11P20809 199 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 CBLP22681 906 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 DNAJA1P31689 397 aaKnown RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 LHX2P50458 406 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 UGT2B15P54855 530 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 CLDN15P56746 228 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 B3GALT5-AS1P59052 145 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 SLC35A1P78382 337 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 TLE1Q04724 770 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 MYBPHQ13203 477 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 GK3PQ14409 553 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 MFSD13AQ14CX5 517 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 RCN1Q15293 331 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 BCL2A1Q16548 175 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM44Q2T9K0 475 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 NHSL2Q5HYW2 709 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 VASNQ6EMK4 673 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 PODNL1Q6PEZ8 512 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 MAMDC2Q7Z304 686 aaPredicted RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 NANOGNBQ7Z5D8 188 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 ST6GALNAC3Q8NDV1 305 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 OR10D3Q8NH80 312 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 FAM57AQ8TBR7 257 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 LRTOMTQ8WZ04 291 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 CPNE4Q96A23 557 aaPredicted RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 SGTBQ96EQ0 304 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 TRIB1Q96RU8 372 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 TIMP4Q99727 224 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 RSPO3Q9BXY4 272 aaPredicted RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 POTEKPQ9BYX7 375 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 SLC19A3Q9BZV2 496 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 TP63Q9H3D4 680 aaPredicted RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 S100A14Q9HCY8 104 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 NANSQ9NR45 359 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 RRP15Q9Y3B9 282 aaKnown RBP7.62□□□□□ -1.19
TRIM48-201ENST00000417545 USP24Q9UPU5 2620 aa7.62□□□□□ -1.19
TRIM48-201ENST00000417545 DSPP15924 2871 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 A0A0J9YW62 118 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 A0A1W2PRQ8 180 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ENO4A6NNW6 628 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 EFCAB9A8MZ26 197 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PIP5K1CO60331 668 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms