RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MGAT4AQ9UM21 535 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 TMEM5Q9Y2B1 443 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 A0A087WV62 115 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 MEN1O00255 615 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 OR10H2O60403 315 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 CELA2BP08218 269 aaPredicted RBP13.32□□□□□ -0.28
HDAC9-208ENST00000417496 POU3F3P20264 500 aaPredicted RBP13.32□□□□□ -0.28
HDAC9-208ENST00000417496 RPS11P62280 158 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC9-208ENST00000417496 RPL13AP3Q6NVV1 102 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF613Q6PF04 617 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF687Q8N1G0 1237 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 CA13Q8N1Q1 262 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 OR8H1Q8NGG4 311 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 STACQ99469 402 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 CACNG6Q9BXT2 260 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 FAM60AQ9NP50 221 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 DNAJB12Q9NXW2 375 aaKnown RBP13.32□□□□□ -0.28
HDAC9-208ENST00000417496 COPS3Q9UNS2 423 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 TRBV2A0A0J9YWF9 115 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 SELENOFO60613 162 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 DHFRP00374 187 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 TYRP1P17643 537 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF10P21506 573 aaPredicted RBP13.32□□□□□ -0.28
HDAC9-208ENST00000417496 PBX2P40425 430 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 BTG1P62324 171 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 KIRREL2Q6UWL6 708 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 SERPINA12Q8IW75 414 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 CSNK1A1LQ8N752 337 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 OR6C4Q8NGE1 309 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 OR51Q1Q8NH59 317 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 SNX33Q8WV41 574 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 CTHRC1Q96CG8 243 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 SCMH1Q96GD3 660 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 HYLS1Q96M11 299 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 LYRM4Q9HD34 91 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 ZFP64Q9NPA5 681 aa13.32□□□□□ -0.28
HDAC9-208ENST00000417496 TNFRSF10AO00220 468 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 GALR3O60755 368 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-208ENST00000417496 FMO6PO60774 539 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 EGFP01133 1207 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 WNT1P04628 370 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 CLDN12P56749 244 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 TAS2R43P59537 309 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 SIRPAP78324 504 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 ALG11Q2TAA5 492 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 CREB3L2Q70SY1 520 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 OR6K6Q8NGW6 343 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF431Q8TF32 576 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-208ENST00000417496 PCNPQ8WW12 178 aaKnown RBP13.31□□□□□ -0.28
HDAC9-208ENST00000417496 SPACA7Q96KW9 195 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 GAS2L1Q99501 681 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-208ENST00000417496 SLC25A18Q9H1K4 315 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 DPAGT1Q9H3H5 408 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 CDCP1Q9H5V8 836 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 PCOLCE2Q9UKZ9 415 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 A0A1B0GVT2 93 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 ANKRD61A6NGH8 418 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 ACOD1A6NK06 481 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 FLRT2O43155 660 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 STOMP27105 288 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 SLC6A6P31641 620 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 UQCRC1P31930 480 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 RPL4P36578 427 aaKnown RBP13.31□□□□□ -0.28
HDAC9-208ENST00000417496 KIAA1324Q6UXG2 1013 aaKnown RBP13.31□□□□□ -0.28
HDAC9-208ENST00000417496 C7orf61Q8IZ16 206 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 MS4A15Q8N5U1 240 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF671Q8TAW3 534 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 BAHD1Q8TBE0 780 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-208ENST00000417496 SMIM19Q96E16 107 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 OR51J1Q9H342 316 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 CHRNA9Q9UGM1 479 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 SPACA6W5XKT8 324 aa13.31□□□□□ -0.28
HDAC9-208ENST00000417496 TGFBR3LH3BV60 316 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 PTHLHP12272 177 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 EDNRAP25101 427 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 OR3A3P47888 321 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 CDK5R1Q15078 307 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 C9orf50Q5SZB4 431 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 HES5Q5TA89 166 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 STPG1Q5TH74 334 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 SFRP4Q6FHJ7 346 aaPredicted RBP13.3□□□□□ -0.28
HDAC9-208ENST00000417496 SDE2Q6IQ49 451 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 OR4C3Q8NH37 302 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 LGALS14Q8TCE9 139 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF426Q9BUY5 554 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 POT1Q9NUX5 634 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 C2orf42Q9NWW7 574 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 HAO2Q9NYQ3 351 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 FLVCR2Q9UPI3 526 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 NPFFR2Q9Y5X5 522 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 OR6C68A6NDL8 312 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 H3BSH0 61 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 TOXO94900 526 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 NKX2-2O95096 273 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 UBL3O95164 117 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 S1PR1P21453 382 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 SSTR2P30874 369 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 PGDP52209 483 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 P2RX3P56373 397 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms