RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 AHSA1O95433 338 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 MT-ATP6P00846 226 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 TP53P04637 393 aaPredicted RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 SPINK2P20155 84 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 PTNP21246 168 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 MST1P26927 711 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 EPHA2P29317 976 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC6A6P31641 620 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CLK1P49759 484 aaKnown RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CXCR4P61073 352 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 ARG2P78540 354 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 TEKQ02763 1124 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CD47Q08722 323 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 SRSF6Q13247 344 aaKnown RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CDK5R2Q13319 367 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 PLPPR5Q32ZL2 321 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 C6orf141Q5SZD1 244 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 SPINK14Q6IE38 97 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC25A25Q6KCM7 469 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 ARSKQ6UWY0 536 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CCDC81Q6ZN84 652 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF620Q6ZNG0 422 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 MAMDC2Q7Z304 686 aaPredicted RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 MEX3DQ86XN8 651 aaKnown RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR2T33Q8NG76 320 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 FANK1Q8TC84 345 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 C5orf34Q96MH7 638 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 POTEKPQ9BYX7 375 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 ADNPQ9H2P0 1102 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 EGLN3Q9H6Z9 239 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 PROK2Q9HC23 129 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CLN6Q9NWW5 311 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 B4GALT7Q9UBV7 327 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF229Q9UJW7 825 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 FBXL2Q9UKC9 423 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 SIGLEC7Q9Y286 467 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 KLF13Q9Y2Y9 288 aaPredicted RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 MRPS18CQ9Y3D5 142 aaKnown RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 SNTNA6NMZ2 147 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 RRP8O43159 456 aaKnown RBP12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 EFSO43281 561 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 NDUFB2O95178 105 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 TFPIP10646 304 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 SRD5A2P31213 254 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 ID4P47928 161 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 DNASE1L1P49184 302 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 MYBPC1Q00872 1141 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 FOXF1Q12946 379 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 MAD2L1BPQ15013 274 aaPredicted RBP12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 TOMM20Q15388 145 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 INPP5JQ15735 1006 aaPredicted RBP12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 SNAPC1Q16533 368 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF74Q16587 644 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 FAM69AQ5T7M9 428 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 C1orf140Q5VVS0 124 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 TMEM236Q5W0B7 351 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 C12orf73Q69YU5 71 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 Q6ZPB1 254 aaPredicted RBP12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 KIF18BQ86Y91 864 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 ENTHD1Q8IYW4 607 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR8J1Q8NGP2 316 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR51A7Q8NH64 312 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 RHOXF1Q8NHV9 184 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC25A43Q8WUT9 341 aaPredicted RBP12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 SAMD8Q96LT4 415 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 GNRHR2Q96P88 292 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 TNFRSF13CQ96RJ3 184 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 KLHDC3Q9BQ90 382 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 PIGQQ9BRB3 760 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 TAPBPLQ9BX59 468 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 ASPNQ9BXN1 380 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 CCDC86Q9H6F5 360 aaKnown RBP12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF552Q9H707 407 aaPredicted RBP12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 FKRPQ9H9S5 495 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZFP64Q9NPA5 681 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 TVP23BQ9NYZ1 205 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 PLA2G3Q9NZ20 509 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 WASF3Q9UPY6 502 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 RNF6Q9Y252 685 aa12.92□□□□□ -0.34
HMGA1P1-201ENST00000415560 CNOT1A5YKK6 2376 aaKnown RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 G3V3Y1 287 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 M0R3G1 203 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 TLX3O43711 291 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 NEURL1O76050 574 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 F10P00742 488 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 SP1P08047 785 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 IGFBP1P08833 259 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 CCDC159P0C7I6 412 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 WT1P19544 449 aaPredicted RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 GTF2E2P29084 291 aaKnown RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 GRK5P34947 590 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 RPS5P46782 204 aaKnown RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 SNRPGP62308 76 aaKnown RBP12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 EGR4Q05215 589 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 SELENBP1Q13228 472 aa12.91□□□□□ -0.34
HMGA1P1-201ENST00000415560 KCTD21Q4G0X4 260 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms