RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 ITGA2P17301 1181 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 TCEA1P23193 301 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 SLC7A1P30825 629 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 IFNA8P32881 189 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 RBM34P42696 430 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 AGFG1P52594 562 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 CDH12P55289 794 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 H3F3AP84243 136 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 EGR4Q05215 589 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 ZNF239Q16600 458 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 TMEM176BQ3YBM2 270 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 HBMQ6B0K9 141 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 SEM1Q6ZVN7 128 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 PIWIL3Q7Z3Z3 882 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 TSEN54Q7Z6J9 526 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 RBM45Q8IUH3 476 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 MARVELD2Q8N4S9 558 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 VANGL1Q8TAA9 524 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 PRR7Q8TB68 274 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 MCUR1Q96AQ8 359 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 CCDC120Q96HB5 630 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 TPD52L3Q96J77 140 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 CLPTM1LQ96KA5 538 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 ZNF300Q96RE9 604 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 TM9SF2Q99805 663 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 TRIM15Q9C019 465 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 TMEM185BQ9H7F4 350 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 RNF122Q9H9V4 155 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 IL1RAPQ9NPH3 570 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 GLRX2Q9NS18 164 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 SELENONQ9NZV5 590 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 SLC7A8Q9UHI5 535 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 ERRFI1Q9UJM3 462 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 MCTS1Q9ULC4 181 aaKnown RBP10.69□□□□□ -0.7
ATG4B-207ENST00000415107 POMPQ9Y244 141 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 ENPP4Q9Y6X5 453 aa10.69□□□□□ -0.7
ATG4B-207ENST00000415107 IGKV1D-42A0A075B6H8 117 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 SLC22A20A6NK97 555 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 ELOA3DA6NLF2 546 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-207ENST00000415107 FTCDNL1E5RQL4 147 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 H0YC42 278 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 CCL21O00585 134 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 TNFSF11O14788 317 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 LRRTM2O43300 516 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 OR2T1O43869 369 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 EIF1BO60739 113 aaKnown RBP10.68□□□□□ -0.7
ATG4B-207ENST00000415107 PRKD3O94806 890 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 STAMBPO95630 424 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 IL18BPO95998 194 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 LDLRP01130 860 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 GLI4P10075 376 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 UMPSP11172 480 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 RHCEP18577 417 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 SFTPDP35247 375 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 MSX2P35548 267 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-207ENST00000415107 EIF1AXP47813 144 aaKnown RBP10.68□□□□□ -0.7
ATG4B-207ENST00000415107 OR1E2P47887 323 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 DIO1P49895 249 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-207ENST00000415107 ST3GAL3Q11203 375 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 MYBPHQ13203 477 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 MFSD13AQ14CX5 517 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 PDK3Q15120 406 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 GUSBP1Q15486 140 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 ELOA3BQ3SY89 546 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 FKBP9P1Q75LS8 142 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 CHMP1BQ7LBR1 199 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 UBQLNLQ8IYU4 475 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 SLC43A2Q8N370 569 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 FAM26EQ8N5C1 309 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 PIK3C3Q8NEB9 887 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 ELOA3Q8NG57 546 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 MFSD8Q8NHS3 518 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 RNF128Q8TEB7 428 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 SMPDL3BQ92485 455 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 CCDC124Q96CT7 223 aaKnown RBP10.68□□□□□ -0.7
ATG4B-207ENST00000415107 SLC41A3Q96GZ6 507 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 ARL5BQ96KC2 179 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 DHRS1Q96LJ7 313 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 EPYCQ99645 322 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 PRSS27Q9BQR3 290 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 PTDSS2Q9BVG9 487 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 NDUFAF4Q9P032 175 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 DOPEY1Q5JWR5 2465 aa10.68□□□□□ -0.7
ATG4B-207ENST00000415107 FLNCQ14315 2725 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 A0A1W2PRQ8 180 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 ZC3H12DA2A288 527 aaKnown RBP10.67□□□□□ -0.7
ATG4B-207ENST00000415107 LIPT2A6NK58 231 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 CPSF4LA6NMK7 179 aaKnown RBP10.67□□□□□ -0.7
ATG4B-207ENST00000415107 HSPB2A8KAH6 182 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 SULT2B1O00204 365 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 CXCL13O43927 109 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 TOXO94900 526 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 AHSA1O95433 338 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 GPIP06744 558 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 IMPDH2P12268 514 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 TNFRSF1BP20333 461 aa10.67□□□□□ -0.7
ATG4B-207ENST00000415107 IDUAP35475 653 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms