RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PANX1Q96RD7 426 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPR22Q99680 433 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RBBP8Q99708 897 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ACBD6Q9BR61 282 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRAF4Q9BUZ4 470 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CALN1Q9BXU9 219 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 MAGT1Q9H0U3 335 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PORCNQ9H237 461 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 SEMA6AQ9H2E6 1030 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 FBXO44Q9H4M3 255 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 MINDY3Q9H8M7 445 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 FN3KRPQ9HA64 309 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 MEAF6Q9HAF1 191 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC38A10Q9HBR0 1119 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 FARSBQ9NSD9 589 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 DDX28Q9NUL7 540 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PAK1IP1Q9NWT1 392 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CNOT2Q9NZN8 540 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 BFARQ9NZS9 450 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PDP1Q9P0J1 537 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TMEM216Q9P0N5 145 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ONECUT1Q9UBC0 465 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CYTH4Q9UIA0 394 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 SATB2Q9UPW6 733 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 EXO1Q9UQ84 846 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PADI2Q9Y2J8 665 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CPQQ9Y646 472 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RNF215Q9Y6U7 377 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 HSPE1-MOB4S4R3N1 261 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CNTNAP1P78357 1384 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 IGKV3D-15A0A087WSY6 115 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 LOC105371267A0A1B0GV96 52 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 DHRS12A0PJE2 317 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ILVBLA1L0T0 632 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 C12orf71A8MTZ7 269 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TCP10L2B9ZVM9 353 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 H0YIG0 161 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 DLGAP1O14490 977 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 HAT1O14929 419 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 UBDO15205 165 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 KMOO15229 486 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CLOCKO15516 846 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 NDUFS4O43181 175 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SCO2O43819 266 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SSX5O60225 188 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRIM3O75382 744 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 BANF1O75531 89 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 LYPLA1O75608 230 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CDC123O75794 336 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SRP72O76094 671 aaKnown RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 MYO1DO94832 1006 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 RHOBTB1O94844 696 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 OXSR1O95747 527 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PTTG1O95997 202 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TNNC2P02585 160 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 C2P06681 752 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 RBP1P09455 135 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRAPPC2P0DI81 140 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRAPPC2BP0DI82 140 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 IL1RNP18510 177 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 IMPDH1P20839 514 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PTNP21246 168 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ITGA3P26006 1051 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 HTR1EP28566 365 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ARL2P36404 184 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ACADSBP45954 432 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 RPS9P46781 194 aaKnown RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 HCAR3P49019 387 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 RPL34P49207 117 aaKnown RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 GMPSP49915 693 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 NDST1P52848 882 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CDH13P55290 713 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SNAP25P60880 206 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CXCR4P61073 352 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 DYNLT1P63172 113 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ADARB1P78563 741 aaKnown RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF45Q02386 682 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CXCL9Q07325 125 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 INCA1Q0VD86 236 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 FADDQ13158 208 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 MFAP5Q13361 173 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PMS2P3Q13401 168 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SNAPC1Q16533 368 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SGCAQ16586 387 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 DGUOKQ16854 277 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF181Q2M3W8 571 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 HKDC1Q2TB90 917 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 IQCCQ4KMZ1 466 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PDLIM3Q53GG5 364 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 LBHQ53QV2 105 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CYBRD1Q53TN4 286 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 BEX5Q5H9J7 111 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PAGE2BQ5JRK9 111 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 FGD3Q5JSP0 725 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SAPCD1Q5SSQ6 148 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CLVS2Q5SYC1 327 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 THEM4Q5T1C6 240 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ATF7IP2Q5U623 682 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms