RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ELP4Q96EB1 424 aa13.58□□□□□ -0.24
CPNE1-208ENST00000414711 NMRK1Q9NWW6 199 aa13.58□□□□□ -0.24
CPNE1-208ENST00000414711 TMCO1Q9UM00 188 aa13.58□□□□□ -0.24
CPNE1-208ENST00000414711 MMP24Q9Y5R2 645 aa13.58□□□□□ -0.24
CPNE1-208ENST00000414711 TMEM129A0AVI4 362 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 TIMM23O14925 209 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
CPNE1-208ENST00000414711 OIP5O43482 229 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 PLPP2O43688 288 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 PLIN3O60664 434 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 SMIM24O75264 130 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 OMGP23515 440 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 CALCRP30988 508 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 THBS4P35443 961 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 P2RX1P51575 399 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 CSNK2A1P68400 391 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-208ENST00000414711 VPS26BQ4G0F5 336 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 SLC9B1Q4ZJI4 515 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 BRICD5Q6PL45 260 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 RHOUQ7L0Q8 258 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 MTDHQ86UE4 582 aaKnown RBP13.57□□□□□ -0.24
CPNE1-208ENST00000414711 CCDC63Q8NA47 563 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 SLC16A11Q8NCK7 471 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 PHOSPHO1Q8TCT1 267 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 TCP10LQ8TDR4 215 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 ANKRD27Q96NW4 1050 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 ZNF665Q9H7R5 613 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 OBP2BQ9NPH6 170 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 SLC7A10Q9NS82 523 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 ZNF275Q9NSD4 429 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-208ENST00000414711 NKIRAS1Q9NYS0 192 aa13.57□□□□□ -0.24
CPNE1-208ENST00000414711 CPSF2Q9P2I0 782 aaKnown RBP13.57□□□□□ -0.24
CPNE1-208ENST00000414711 TMEM120BA0PK00 339 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 VSTM5A8MXK1 200 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 SULT2B1O00204 365 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 PPIHO43447 177 aaKnown RBP13.56□□□□□ -0.24
CPNE1-208ENST00000414711 NKX2-2O95096 273 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 PROCP04070 461 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 CECR9P0C854 216 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 NTSP30990 170 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 RAE1P78406 368 aaKnown RBP13.56□□□□□ -0.24
CPNE1-208ENST00000414711 PRSS53Q2L4Q9 553 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 OR4F6Q8NGB9 312 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 OR6Y1Q8NGX8 325 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 PIGXQ8TBF5 258 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 GPR119Q8TDV5 335 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 C16orf78Q8WTQ4 265 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 RDH5Q92781 318 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 HOXB13Q92826 284 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-208ENST00000414711 TMIGD2Q96BF3 282 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 ZNF524Q96C55 264 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 CCDC126Q96EE4 140 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 NSUN5Q96P11 429 aaKnown RBP13.56□□□□□ -0.24
CPNE1-208ENST00000414711 CITED1Q99966 193 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 RBM4BQ9BQ04 359 aaKnown RBP13.56□□□□□ -0.24
CPNE1-208ENST00000414711 C7orf69Q9H7B7 122 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 VPS29Q9UBQ0 182 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 OPN4Q9UHM6 478 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 EMCNQ9ULC0 261 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 CARD8Q9Y2G2 431 aa13.56□□□□□ -0.24
CPNE1-208ENST00000414711 CLDN34H7C241 214 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 KCNK2O95069 426 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 HPXP02790 462 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 MYL2P10916 166 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 CDH2P19022 906 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-208ENST00000414711 COL8A2P25067 703 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 MPGP29372 298 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 LCN1P31025 176 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 MAP3K8P41279 467 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-208ENST00000414711 SLC16A1P53985 500 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 TMEM33P57088 247 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 POU3F1Q03052 451 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-208ENST00000414711 HGFACQ04756 655 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 SLC25A53Q5H9E4 307 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 FAM219BQ5XKK7 198 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 SAXO2Q658L1 398 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 TMPPEQ6ZT21 453 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 MTERF4Q7Z6M4 381 aaKnown RBP13.55□□□□□ -0.24
CPNE1-208ENST00000414711 ARFGAP2Q8N6H7 521 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 ZHX1-C8orf76Q96EF9 292 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 AMDHD1Q96NU7 426 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 GLIPR2Q9H4G4 154 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 SEC61A2Q9H9S3 476 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 SLC17A7Q9P2U7 560 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 SNX6Q9UNH7 406 aa13.55□□□□□ -0.24
CPNE1-208ENST00000414711 CPA3P15088 417 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 DDCP20711 480 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 GATA3P23771 443 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 ATP5F1P24539 256 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-208ENST00000414711 NDUFAF6Q330K2 333 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 HHATQ5VTY9 493 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 ANKRD16Q6P6B7 361 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 ZYG11AQ6WRX3 759 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 SPATC1Q76KD6 591 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 SLC22A9Q8IVM8 553 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 TMEM151AQ8N4L1 468 aa13.54□□□□□ -0.24
CPNE1-208ENST00000414711 PTGR2Q8N8N7 351 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-208ENST00000414711 ANKRD42Q8N9B4 389 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms