RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GPR171O14626 319 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 EIF1BO60739 113 aaKnown RBP9.96□□□□□ -0.82
RFFL-204ENST00000414419 SERPINB7O75635 380 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 RAF1P04049 648 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 CD1EP15812 388 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 GPX2P18283 190 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 PSMB1P20618 241 aaKnown RBP9.96□□□□□ -0.82
RFFL-204ENST00000414419 CRYGSP22914 178 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 IL32P24001 234 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 CCKARP32238 428 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 ACAA2P42765 397 aaKnown RBP9.96□□□□□ -0.82
RFFL-204ENST00000414419 NFYCQ13952 458 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 SCARB2Q14108 478 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 RUNDC3AQ59EK9 446 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 CXorf67Q86X51 503 aaPredicted RBP9.96□□□□□ -0.82
RFFL-204ENST00000414419 BHLHE22Q8NFJ8 381 aaPredicted RBP9.96□□□□□ -0.82
RFFL-204ENST00000414419 ZNF300Q96RE9 604 aaPredicted RBP9.96□□□□□ -0.82
RFFL-204ENST00000414419 TAPBPLQ9BX59 468 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 POTEKPQ9BYX7 375 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 ACTR6Q9GZN1 396 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 ADAM19Q9H013 955 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 OR10A4Q9H209 315 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 TMEM38AQ9H6F2 299 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 MED4Q9NPJ6 270 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 FGFR1OP2Q9NVK5 253 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 ANGPT4Q9Y264 503 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 PLEKHA6Q9Y2H5 1048 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 NOSIPQ9Y314 301 aaKnown RBP9.96□□□□□ -0.82
RFFL-204ENST00000414419 GMEB1Q9Y692 573 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 PRR14LQ5THK1 2151 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 MED13LQ71F56 2210 aa9.96□□□□□ -0.82
RFFL-204ENST00000414419 TRBV5-3A0A0A0MS03 114 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 PRORSD1PA6NEY8 169 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 A8MVM7 634 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 ADAP00813 363 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 GPIP06744 558 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 PRG2P13727 222 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 KLK2P20151 261 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 FPR1P21462 350 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 PRKAR1BP31321 381 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 IDUAP35475 653 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 OR3A2P47893 321 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 GUCY1A3Q02108 690 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 SF3A3Q12874 501 aaKnown RBP eCLIP9.95□□□□□ -0.82
RFFL-204ENST00000414419 P2RY6Q15077 328 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 PDK3Q15120 406 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 CYP51A1Q16850 503 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 MMEL1Q495T6 779 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 SFRP5Q5T4F7 317 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 ALKBH2Q6NS38 261 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 PAMR1Q6UXH9 720 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 DLEU7Q6UYE1 221 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 Q6ZT83 130 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 SERPINA11Q86U17 422 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 WFDC8Q8IUA0 241 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 UBE2J2Q8N2K1 259 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 DPP10Q8N608 796 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 HIPK4Q8NE63 616 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 KISS1RQ969F8 398 aaPredicted RBP9.95□□□□□ -0.82
RFFL-204ENST00000414419 SLC35B4Q969S0 331 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 ANKRD27Q96NW4 1050 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 CGREF1Q99674 301 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
RFFL-204ENST00000414419 ZNF385DQ9H6B1 395 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 PLEKHF2Q9H8W4 249 aa9.95□□□□□ -0.82
RFFL-204ENST00000414419 PRRC2AP48634 2157 aaKnown RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 HEATR1Q9H583 2144 aaKnown RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 IGKV3D-15A0A087WSY6 115 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ZC3H12DA2A288 527 aaKnown RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 ELOA3DA6NLF2 546 aaPredicted RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 DEFB108AA8MXU0 73 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 FRS3O43559 492 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 MRPL33O75394 65 aaKnown RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 GCM2O75603 506 aaPredicted RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 AQP1P29972 269 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 NCALDP61601 193 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 BNIP2Q12982 314 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ITGADQ13349 1161 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 CEACAM7Q14002 265 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 CYLC2Q14093 348 aaPredicted RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 MAPRE2Q15555 327 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 OR7A5Q15622 319 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ELOA3BQ3SY89 546 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 BEX5Q5H9J7 111 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ABLIM2Q6H8Q1 611 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 PAQR6Q6TCH4 344 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 BHLHA15Q7RTS1 189 aaPredicted RBP9.94□□□□□ -0.82
RFFL-204ENST00000414419 ARMC8Q8IUR7 673 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 CCDC103Q8IW40 242 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 GABRG1Q8N1C3 465 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 C10orf111Q8N326 155 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 C11orf65Q8NCR3 313 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 ELOA3Q8NG57 546 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 HSD17B8Q92506 261 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 APH1AQ96BI3 265 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 S100PBPQ96BU1 408 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 FOXC2Q99958 501 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 SH3GL1Q99961 368 aa9.94□□□□□ -0.82
RFFL-204ENST00000414419 CPPED1Q9BRF8 314 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms