RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 POU2F1P14859 743 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 PRDX6P30041 224 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 IDUAP35475 653 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 PLAURQ03405 335 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 RASGEF1BQ0VAM2 473 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 ELOA3BQ3SY89 546 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 RABL3Q5HYI8 236 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 C5orf46Q6UWT4 87 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 ELOA3Q8NG57 546 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 PIGXQ8TBF5 258 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 RNF217Q8TC41 542 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 FAM222BQ8WU58 562 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 ZNF524Q96C55 264 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 PIF1Q9H611 641 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 GALNT8Q9NY28 637 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 KLHL13Q9P2N7 655 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 GPR171O14626 319 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 CYTIPO60759 359 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 AHSA1O95433 338 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 FESP07332 822 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 PRG2P13727 222 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 GTF2E2P29084 291 aaKnown RBP13.13□□□□□ -0.31
CHD1-202ENST00000414220 CD79BP40259 229 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 PCBP3P57721 371 aaKnown RBP13.13□□□□□ -0.31
CHD1-202ENST00000414220 TLE4Q04727 773 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 PDK3Q15120 406 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 GUSBP1Q15486 140 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 FAM91A1Q658Y4 838 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 ULK3Q6PHR2 472 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 HACD2Q6Y1H2 254 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 TUSC5Q8IXB3 177 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 ZNF610Q8N9Z0 462 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 SMYD1Q8NB12 490 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 OR2T12Q8NG77 320 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 ABHD3Q8WU67 409 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 PROX1Q92786 737 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 SLC47A1Q96FL8 570 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 ARL5BQ96KC2 179 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 LRRC37BQ96QE4 947 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
CHD1-202ENST00000414220 BAG5Q9UL15 447 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 SLC9A8Q9Y2E8 581 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 CHST2Q9Y4C5 530 aa13.13□□□□□ -0.31
CHD1-202ENST00000414220 IGHV3-15A0A0B4J1V0 119 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 ELOVL7A1L3X0 281 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 ZNF724A8MTY0 619 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 FAM220BPB1ANY3 271 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 FXYD1O00168 92 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 SMAD9O15198 467 aaKnown RBP13.12□□□□□ -0.31
CHD1-202ENST00000414220 GSTA4O15217 222 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 FRS3O43559 492 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 OR2T1O43869 369 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 TPST1O60507 370 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 GMNNO75496 209 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 GOSR1O95249 250 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 AGTR1P30556 359 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 NUDT2P50583 147 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 DMTNQ08495 405 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 EXOC3L2Q2M3D2 409 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 ALG10BQ5I7T1 473 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 GKAP1Q5VSY0 366 aaPredicted RBP13.12□□□□□ -0.31
CHD1-202ENST00000414220 FBXW10Q5XX13 1052 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 CCDC80Q76M96 950 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 PIGWQ7Z7B1 504 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 C3orf49Q96BT1 292 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 ZNF583Q96ND8 569 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 EPYCQ99645 322 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 MYLK2Q9H1R3 596 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 DOCK7Q96N67 2140 aa13.12□□□□□ -0.31
CHD1-202ENST00000414220 CACNA1CQ13936 2221 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 C16orf97H3BN30 126 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 FMO6PO60774 539 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 LGI1O95970 557 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 CGAP01215 116 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 OPN1SWP03999 348 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 EPXP11678 715 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 FPR1P21462 350 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 IFNA8P32881 189 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 GZMMP51124 257 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 MNAT1P51948 309 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 HOXC5Q00444 222 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 CEACAM7Q14002 265 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 SWT1Q5T5J6 900 aaKnown RBP13.11□□□□□ -0.31
CHD1-202ENST00000414220 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 TMEM225Q6GV28 225 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 PAQR6Q6TCH4 344 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 ATG4DQ86TL0 474 aaPredicted RBP13.11□□□□□ -0.31
CHD1-202ENST00000414220 CALHM3Q86XJ0 350 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 ZNF100Q8IYN0 542 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 MICU2Q8IYU8 434 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 DACH2Q96NX9 599 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 MCHR1Q99705 422 aa13.11□□□□□ -0.31
CHD1-202ENST00000414220 ARHGDIGQ99819 225 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms