RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 WDR77Q9BQA1 342 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-203ENST00000414174 TTYH2Q9BSA4 534 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 TIMM29Q9BSF4 260 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM208Q9BTX3 173 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 MCRIP2Q9BUT9 160 aaKnown RBP3.31□□□□□ -1.88
SF3B1-203ENST00000414174 WWTR1Q9GZV5 400 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 TLNRD1Q9H1K6 362 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 UBTD1Q9HAC8 227 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 ANKRD10Q9NXR5 420 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 TAS2R14Q9NYV8 317 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 MRTO4Q9UKD2 239 aaKnown RBP3.31□□□□□ -1.88
SF3B1-203ENST00000414174 RNF150Q9ULK6 438 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 A4GNTQ9UNA3 340 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 RPL26L1Q9UNX3 145 aaKnown RBP3.31□□□□□ -1.88
SF3B1-203ENST00000414174 B3GALT5Q9Y2C3 310 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 MEMO1Q9Y316 297 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 WNT6Q9Y6F9 365 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 BAZ1AQ9NRL2 1556 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 CAMSAP2Q08AD1 1489 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SNED1Q8TER0 1413 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 A0A087X0K7 114 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 KBTBD11-OT1A0A1B0GTJ5 212 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 FEZF1A0PJY2 475 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 FAM90A10PA6NDY2 464 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 GJE1A6NN92 205 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 LEUTXA8MZ59 168 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 HACD1B0YJ81 288 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 H0Y980 276 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 I6L893 689 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 IFNL4K9M1U5 179 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ZBTB5O15062 677 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 RGS5O15539 181 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 OR1F1O43749 312 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 NRP2O60462 931 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 OR2J2O76002 312 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SCGNO76038 276 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 TTC4O95801 387 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 PAK4O96013 591 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 AMY1AP04745 511 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 GRPP07492 148 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 CHRM4P08173 479 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 IFI30P13284 250 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 FOLR1P15328 257 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 GZMHP20718 246 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 EFNA1P20827 205 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 DRD4P21917 467 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ACADLP28330 430 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 PMELP40967 661 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 CRYBB2P43320 205 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 TTPAP49638 278 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 MTHFSP49914 203 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 TNFSF10P50591 281 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 XKP51811 444 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 CHN2P52757 468 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 NAPAP54920 295 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 RRADP55042 308 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 TPTEP56180 551 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 PLP1P60201 277 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 KRTAP10-9P60411 292 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ERVPABLB-1P60509 514 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 RPS20P60866 119 aaKnown RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 DYNLL1P63167 89 aaKnown RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 PJVKQ0ZLH3 352 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 KRT33BQ14525 404 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SF3A2Q15428 464 aaKnown RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 RPE65Q16518 533 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 CALCRLQ16602 461 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 KCTD19Q17RG1 926 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 FAM214AQ32MH5 1076 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 DCAF4L1Q3SXM0 396 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ACSM3Q53FZ2 586 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 LRRC73Q5JTD7 316 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SYT6Q5T7P8 510 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SDHAF4Q5VUM1 108 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 UBE2UQ5VVX9 321 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 RESP18Q5W5W9 173 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SLC22A10Q63ZE4 541 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SAXO2Q658L1 398 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM42Q69YG0 159 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SLC27A4Q6P1M0 643 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 KCNIP4Q6PIL6 250 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ENPP7Q6UWV6 458 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ABHD15Q6UXT9 468 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 KYAT3Q6YP21 454 aaKnown RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 SIGLEC15Q6ZMC9 328 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 Q6ZSN1 163 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 AHSA2Q719I0 299 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ZNF767PQ75MW2 155 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 H2BFWTQ7Z2G1 175 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 GPAT4Q86UL3 456 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 GPBP1Q86WP2 473 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 LRRC28Q86X40 367 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 RNF130Q86XS8 419 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ADGRG3Q86Y34 549 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ERI1Q8IV48 349 aaKnown RBP3.3□□□□□ -1.88
SF3B1-203ENST00000414174 GLB1L2Q8IW92 636 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 STHQ8IWL8 128 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 ZBTB8OSQ8IWT0 167 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 NLGN4XQ8N0W4 816 aa3.3□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM123Q8N131 208 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms