RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SFRP5Q5T4F7 317 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 GCNT6Q5T4J0 391 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 DLEU7Q6UYE1 221 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 GALNT5Q7Z7M9 940 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 MBD6Q96DN6 1003 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 TMEM45AQ9NWC5 275 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-207ENST00000413642 ABCA4P78363 2273 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 A0A0G2JND7 137 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 C5orf58C9J3I9 102 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 ARAFP10398 606 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 FPR1P21462 350 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 COMTD1Q86VU5 262 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 STEAP2Q8NFT2 490 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 BBS10Q8TAM1 723 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 STON2Q8WXE9 905 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 DDIT4LQ96D03 193 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 ZHX1-C8orf76Q96EF9 292 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 UBTD1Q9HAC8 227 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 TRAPPC4Q9Y296 219 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 IFT52Q9Y366 437 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 F8P00451 2351 aa23.31■■□□□ 1.32
VEGFA-207ENST00000413642 IGKV3D-15A0A087WSY6 115 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 PLAUP00749 431 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 IGHV3-9P01782 118 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 CXCR1P25024 350 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 FKBP2P26885 142 aaKnown RBP23.3■■□□□ 1.32
VEGFA-207ENST00000413642 PRAMEF8Q5VWM4 474 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 PRAMEF7Q5VXH5 474 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 WBP2NLQ6ICG8 309 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 RETREG3Q86VR2 466 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 ZNF100Q8IYN0 542 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 RABEP2Q9H5N1 569 aa23.3■■□□□ 1.32
VEGFA-207ENST00000413642 CACYBPQ9HB71 228 aaKnown RBP23.3■■□□□ 1.32
VEGFA-207ENST00000413642 PRRC2AP48634 2157 aaKnown RBP23.3■■□□□ 1.32
VEGFA-207ENST00000413642 TEP1Q99973 2627 aaKnown RBP23.29■■□□□ 1.32
VEGFA-207ENST00000413642 LYZL6O75951 148 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 IL32P24001 234 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 IRX1P78414 480 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-207ENST00000413642 H3F3AP84243 136 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 CDK6Q00534 326 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 PDK3Q15120 406 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 BEX5Q5H9J7 111 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 KISS1RQ969F8 398 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-207ENST00000413642 ALPK1Q96QP1 1244 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 CPPED1Q9BRF8 314 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-207ENST00000413642 HDHD5Q9BXW7 423 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 OR10A4Q9H209 315 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 GMEB1Q9Y692 573 aa23.29■■□□□ 1.32
VEGFA-207ENST00000413642 HIVEP1P15822 2718 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 DNPH1O43598 174 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 TPST1O60507 370 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 GPX2P18283 190 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 PPIBP23284 216 aaKnown RBP23.28■■□□□ 1.32
VEGFA-207ENST00000413642 COPZ1P61923 177 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 SLC35A1P78382 337 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 ITGADQ13349 1161 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 CEACAM7Q14002 265 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 SELPLGQ14242 412 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 P2RY6Q15077 328 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 TAB1Q15750 504 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 ADRM1Q16186 407 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 RUNDC3AQ59EK9 446 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 Q6ZT83 130 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 ATG4DQ86TL0 474 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-207ENST00000413642 PIGXQ8TBF5 258 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 PLPPR2Q96GM1 343 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 TMEM120AQ9BXJ8 343 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 EMC3Q9P0I2 261 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 LEF1Q9UJU2 399 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-207ENST00000413642 NOSIPQ9Y314 301 aaKnown RBP23.28■■□□□ 1.32
VEGFA-207ENST00000413642 NDUFAF1Q9Y375 327 aa23.28■■□□□ 1.32
VEGFA-207ENST00000413642 IGHV1-2P23083 117 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 ADSLP30566 484 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-207ENST00000413642 OR7A5Q15622 319 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 ACKR1Q16570 336 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 ZSWIM7Q19AV6 140 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 GLIPR1L2Q4G1C9 344 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 REEP3Q6NUK4 255 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 BHLHA15Q7RTS1 189 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-207ENST00000413642 DHDDSQ86SQ9 333 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 C3orf49Q96BT1 292 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 PRR14Q9BWN1 585 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 ARMC7Q9H6L4 198 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 TRIM33Q9UPN9 1127 aa23.27■■□□□ 1.32
VEGFA-207ENST00000413642 LIPT2A6NK58 231 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 ETS2P15036 469 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 AQP1P29972 269 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 IDUAP35475 653 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 SLC16A1P53985 500 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 SCARB2Q14108 478 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 TGIF2LYQ8IUE0 185 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 TMEM99Q8N816 258 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 POTEKPQ9BYX7 375 aa23.26■■□□□ 1.31
VEGFA-207ENST00000413642 EVPLLA8MZ36 301 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 AKR7A3O95154 331 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 MAP2K6P52564 334 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 FOXG1P55316 489 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-207ENST00000413642 CGB2Q6NT52 195 aa23.25■■□□□ 1.31
VEGFA-207ENST00000413642 ZNF704Q6ZNC4 412 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms