RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 PSD2Q9BQI7 771 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 MED18Q9BUE0 208 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 CLEC4MQ9H2X3 399 aaPredicted RBP5.7□□□□□ -1.5
USP54-202ENST00000413442 KAT8Q9H7Z6 458 aaKnown RBP5.7□□□□□ -1.5
USP54-202ENST00000413442 EFCAB1Q9HAE3 211 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 TMEM27Q9HBJ8 222 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 NPHS2Q9NP85 383 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 SLC25A37Q9NYZ2 338 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 CRIM1Q9NZV1 1036 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 VAPAQ9P0L0 249 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.7□□□□□ -1.5
USP54-202ENST00000413442 TESQ9UGI8 421 aaKnown RBP5.7□□□□□ -1.5
USP54-202ENST00000413442 DCTN4Q9UJW0 460 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 BAG5Q9UL15 447 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 RASD1Q9Y272 281 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 ZNF443Q9Y2A4 671 aaPredicted RBP5.7□□□□□ -1.5
USP54-202ENST00000413442 B3GALT5Q9Y2C3 310 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 SLC9A8Q9Y2E8 581 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 TESMINQ9Y4I5 508 aa5.7□□□□□ -1.5
USP54-202ENST00000413442 NPIPA5A0A0B4J1W7 369 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NPIPA7E9PJI5 369 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 OIP5O43482 229 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 FZD7O75084 574 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NPIPB7O75200 414 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ENTPD5O75356 428 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 MFN2O95140 757 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 LGI1O95970 557 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NPIPA8P0DM63 369 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 THRBP10828 461 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 DNASE1P24855 282 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 IDUAP35475 653 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 PCBP3P57721 371 aaKnown RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 FAM27E3Q08E93 113 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 KLF10Q13118 480 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NFYCQ13952 458 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 SCARB2Q14108 478 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 POU4F3Q15319 338 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 TRMT5Q32P41 509 aaKnown RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 SPATS1Q496A3 300 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 TIMM23BQ5SRD1 257 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 FBXW9Q5XUX1 488 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NANOGP8Q6NSW7 305 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 VWA1Q6PCB0 445 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ZNF613Q6PF04 617 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 HACD2Q6Y1H2 254 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 STAC2Q6ZMT1 411 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 DHDDSQ86SQ9 333 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 CDH24Q86UP0 819 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 TMEM200AQ86VY9 491 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 SNX32Q86XE0 403 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ARMC8Q8IUR7 673 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 TUSC5Q8IXB3 177 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 CCDC36Q8IYA8 594 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ZNF100Q8IYN0 542 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 GABRG1Q8N1C3 465 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 C17orf78Q8N4C9 275 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ADPRHL1Q8NDY3 354 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 C1orf162Q8NEQ5 155 aaPredicted RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 SLC26A7Q8TE54 656 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 TMEM45BQ96B21 275 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 LRRC58Q96CX6 371 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 WFIKKN1Q96NZ8 548 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ALPK1Q96QP1 1244 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 TMEM43Q9BTV4 400 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 TMEM120AQ9BXJ8 343 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 SLC19A3Q9BZV2 496 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 GRIP2Q9C0E4 1043 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NSRP1Q9H0G5 558 aaKnown RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 CXXC4Q9H2H0 198 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ESRP2Q9H6T0 727 aaKnown RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 COQ10BQ9H8M1 238 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NANOGQ9H9S0 305 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 OBP2BQ9NPH6 170 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 SAR1AQ9NR31 198 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 CTPS2Q9NRF8 586 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 SLC6A13Q9NSD5 602 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 BEX4Q9NWD9 120 aaPredicted RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 ZNF446Q9NWS9 450 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 FBXO9Q9UK97 447 aaPredicted RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 MGAT4BQ9UQ53 548 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 NOSIPQ9Y314 301 aaKnown RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 CORINQ9Y5Q5 1042 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 MAGED1Q9Y5V3 778 aaPredicted RBP5.69□□□□□ -1.5
USP54-202ENST00000413442 UNC79Q9P2D8 2635 aa5.69□□□□□ -1.5
USP54-202ENST00000413442 MED12Q93074 2177 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ITPR2Q14571 2701 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 A0A087WUJ7 227 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 GMNCA6NCL1 334 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 LIPT2A6NK58 231 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 AQP7P3A6NL99 342 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ELOA3DA6NLF2 546 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 ZNF716A6NP11 495 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 H0YC42 278 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 M0QX08 132 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 AP3D1O14617 1153 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 SMAD9O15198 467 aaKnown RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 ARHGEF9O43307 516 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 AKAP8O43823 692 aaKnown RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 GMFGO60234 142 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms