RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 CASP2P42575 452 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 BDKRB1P46663 353 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 SLC11A1P49279 550 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 KPNA2P52292 529 aaKnown RBP0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 HERVK_113P63132 956 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 ERVK-8P63133 956 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 SPP2Q13103 211 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 LAGE3Q14657 143 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 CHI3L2Q15782 390 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 NDUFA9Q16795 377 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 MEP1BQ16820 701 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZNF789Q5FWF6 425 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 KLF17Q5JT82 389 aaPredicted RBP0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 GPRC6AQ5T6X5 926 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 TMEM225Q6GV28 225 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 NTM-AS1Q6ZSK4 140 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 LANCL3Q6ZV70 420 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 MIER3Q7Z3K6 550 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZNF571Q7Z3V5 609 aaPredicted RBP0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 LRRC17Q8N6Y2 441 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 MCOLN3Q8TDD5 553 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 DEPDC1BQ8WUY9 529 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 RAPGEF5Q92565 580 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 LRRC58Q96CX6 371 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 CFAP36Q96G28 342 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 SULT4A1Q9BR01 284 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 ERVK-6Q9BXR3 956 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 AP1M1Q9BXS5 423 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZNF717Q9BY31 904 aaPredicted RBP0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 TRPV6Q9H1D0 765 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 SIAEQ9HAT2 523 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 C1orf123Q9NWV4 160 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 CNOT2Q9NZN8 540 aaKnown RBP0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZNRD1Q9P1U0 126 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 GALPQ9UBC7 116 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 WARS2Q9UGM6 360 aaKnown RBP0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 RAB23Q9ULC3 237 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 SVILO95425 2214 aa0.18□□□□□ -2.38
RNU4-43P-201ENST00000410628 ANKRD30BLA7E2S9 258 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 INS-IGF2F8WCM5 200 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 H7C0S8 307 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 AGPAT2O15120 278 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZBTB14O43829 449 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CHST1O43916 411 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ECI2O75521 394 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ADCY5O95622 1261 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 PRB4P10163 310 aaPredicted RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 UROSP10746 265 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 BCKDHAP12694 445 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 TGFBR2P37173 567 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 MAGEA4P43358 317 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ASMTP46597 345 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CNN1P51911 297 aaKnown RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 PLK1P53350 603 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ESRRGP62508 458 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 FLI1Q01543 452 aaPredicted RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 HMGCS1Q01581 520 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 TNFRSF9Q07011 255 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ASPHQ12797 758 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 SLMAPQ14BN4 828 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZSWIM7Q19AV6 140 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ATL3Q6DD88 541 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 LCN12Q6JVE5 192 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 NEK5Q6P3R8 708 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 PAQR9Q6ZVX9 377 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 LRRC70Q7Z2Q7 622 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 SNX32Q86XE0 403 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CNTN4Q8IWV2 1026 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 RDH10Q8IZV5 341 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 GATSQ8NAP1 163 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 C1orf64Q8NEQ6 169 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ACTRT1Q8TDG2 376 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 FGF11Q92914 225 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 UPRTQ96BW1 309 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 SLC25A36Q96CQ1 311 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 SDSLQ96GA7 329 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 DOK1Q99704 481 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 BAG1Q99933 345 aaPredicted RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZNF649Q9BS31 505 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 MRPL9Q9BYD2 267 aaKnown RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CRNKL1Q9BZJ0 848 aaKnown RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 C20orf85Q9H1P6 137 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 RNF167Q9H6Y7 350 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 AKIRIN1Q9H9L7 192 aaPredicted RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CLCF1Q9UBD9 225 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CFDP1Q9UEE9 299 aaPredicted RBP0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CRLS1Q9UJA2 301 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 SLC25A15Q9Y619 301 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 NOTCH1P46531 2555 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 CARMIL3Q8ND23 1372 aa0.17□□□□□ -2.38
RNU4-43P-201ENST00000410628 RP1L1Q8IWN7 2480 aaPredicted RBP0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 NFASCO94856 1347 aa0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 PRSS37A4D1T9 235 aa0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 RAD51BO15315 384 aa0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 MBTPS2O43462 519 aa0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 DKC1O60832 514 aaKnown RBP eCLIP0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 IGKV1-16P04430 117 aa0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 ZNF806P0C7X5 589 aa0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 GDI2P50395 445 aaKnown RBP0.16□□□□□ -2.38
RNU4-43P-201ENST00000410628 SNU13P55769 128 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms