RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OMPP47874 163 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 BIDP55957 195 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 SLC26A5P58743 744 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 IL11RAQ14626 422 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 C3AR1Q16581 482 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 OR7E24Q6IFN5 339 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 NIPAL3Q6P499 406 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 ZNF417Q8TAU3 575 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 UBASH3BQ8TF42 649 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 THAP4Q8WY91 577 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 TMEM80Q96HE8 168 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 FAM71F1Q96KD3 344 aaPredicted RBP10.46□□□□□ -0.74
SNX13-202ENST00000409604 ZNF587Q96SQ5 575 aaPredicted RBP10.46□□□□□ -0.74
SNX13-202ENST00000409604 TCFL5Q9UL49 500 aa10.46□□□□□ -0.74
SNX13-202ENST00000409604 AGAP5A6NIR3 686 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ZNHIT1O43257 154 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 CXCL13O43927 109 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 PLOD3O60568 738 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 CBX7O95931 251 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 EVI2BP34910 448 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 RHAGQ02094 409 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 CDK5R2Q13319 367 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 BLMHQ13867 455 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 AGAP7PQ5VUJ5 663 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 C22orf42Q6IC83 251 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 FAM180AQ6UWF9 173 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 FAM131AQ6UXB0 335 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 TMEM102Q8N9M5 508 aaPredicted RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 PSD4Q8NDX1 1056 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ROBO4Q8WZ75 1007 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ANKRD9Q96BM1 317 aaPredicted RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 DGCR14Q96DF8 476 aaKnown RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 C11orf24Q96F05 449 aaPredicted RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 ZNF845Q96IR2 970 aaPredicted RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 AGAP4Q96P64 663 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 MGLLQ99685 303 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 PLEK2Q9NYT0 353 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 KIF26BQ2KJY2 2108 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 DOPEY2Q9Y3R5 2298 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ZNF670-ZNF695F2Z2N8 137 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 TRMUO75648 421 aaKnown RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 IDUAP35475 653 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 IL18Q14116 193 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 PRICKLE4Q2TBC4 344 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 PTRH1Q86Y79 214 aaKnown RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 ACBD7Q8N6N7 88 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 KBTBD8Q8NFY9 601 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ZNF675Q8TD23 568 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 SGCDQ92629 289 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ZNF597Q96LX8 424 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 A4GALTQ9NPC4 353 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 INIPQ9NRY2 104 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 GPATCH2Q9NW75 528 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 UBAP1Q9NZ09 502 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 PCDHGA6Q9Y5G7 932 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 LOC100509620A0A075B734 347 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 TRBV2A0A0J9YWF9 115 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 OR2T1O43869 369 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 PNMTP11086 282 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ZNF20P17024 532 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 PPP3R1P63098 170 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 TOMM34Q15785 309 aaPredicted RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 ZBED5Q49AG3 693 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 C1QL3Q5VWW1 255 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 ANKRD37Q7Z713 158 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 BATF2Q8N1L9 274 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 TMEM38AQ9H6F2 299 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 C8orf4Q9NR00 106 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 SIRT3Q9NTG7 399 aaPredicted RBP10.45□□□□□ -0.74
SNX13-202ENST00000409604 DAPK2Q9UIK4 370 aa10.45□□□□□ -0.74
SNX13-202ENST00000409604 IDH3BO43837 385 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 LGI1O95970 557 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ALPLP05186 524 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ITGA5P08648 1049 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 HTR1AP08908 422 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ADH7P40394 386 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 SLC6A8P48029 635 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 CARD18P57730 90 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ROR2Q01974 943 aaKnown RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 PLP2Q04941 152 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNX13-202ENST00000409604 KRR1Q13601 381 aaKnown RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 EXT1Q16394 746 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ACER2Q5QJU3 275 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 MEIOBQ8N635 442 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 RHNO1Q9BSD3 238 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ACER3Q9NUN7 267 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 CCDC163A0A0D9SF12 145 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 CYR61O00622 381 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 SMAD9O15198 467 aaKnown RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 AKAP8O43823 692 aaKnown RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 HCKP08631 526 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 RAB25P57735 213 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 COX10Q12887 443 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 CORO6Q6QEF8 472 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 WDR74Q6RFH5 385 aaPredicted RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 DPY19L4Q7Z388 723 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 SETD6Q8TBK2 473 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 NAA11Q9BSU3 229 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms