RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 RSPH9Q9H1X1 276 aaPredicted RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 SMYD3Q9H7B4 428 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 WDR76Q9H967 626 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 EML4Q9HC35 981 aaKnown RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 AATFQ9NY61 560 aaKnown RBP eCLIP2.35□□□□□ -2.03
PMS1-203ENST00000409593 RBAKQ9NYW8 714 aaPredicted RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 GNG12Q9UBI6 72 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 ATP10DQ9P241 1426 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 GSAPA4D1B5 854 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 HIP1O00291 1037 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 LAD1O00515 517 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 HNRNPA2B1P22626 353 aaKnown RBP2.34□□□□□ -2.03
PMS1-203ENST00000409593 HOXA9P31269 272 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 DAP3P51398 398 aaKnown RBP2.34□□□□□ -2.03
PMS1-203ENST00000409593 PIGGQ5H8A4 983 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 PLBD1Q6P4A8 553 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 TMIGD1Q6UXZ0 262 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 ABHD12BQ7Z5M8 362 aaPredicted RBP2.34□□□□□ -2.03
PMS1-203ENST00000409593 ACOT1Q86TX2 421 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 DHRSXQ8N5I4 330 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 OR6C4Q8NGE1 309 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 SLC22A8Q8TCC7 542 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 SLC35A5Q9BS91 424 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 MRPL13Q9BYD1 178 aaKnown RBP2.34□□□□□ -2.03
PMS1-203ENST00000409593 C1orf21Q9H246 121 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 CALHM2Q9HA72 323 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 NUDT15Q9NV35 164 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 DEC1Q9P2X7 70 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 HOOK1Q9UJC3 728 aaKnown RBP2.34□□□□□ -2.03
PMS1-203ENST00000409593 GSTK1Q9Y2Q3 226 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 PTCH1Q13635 1447 aa2.34□□□□□ -2.03
PMS1-203ENST00000409593 IGHV1OR21-1A0A087WYE8 117 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 A0A1B0GUS0 222 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 LRATO95237 230 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 CXCR2P25025 360 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 VDAC2P45880 294 aaPredicted RBP2.34□□□□□ -2.04
PMS1-203ENST00000409593 AP3M2P53677 418 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 PLA2G16P53816 162 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 ZNF763Q0D2J5 394 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 RIPK1Q13546 671 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 BOLA3Q53S33 107 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 GPRC6AQ5T6X5 926 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 C11orf71Q6IPW1 123 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 GDPD3Q7L5L3 318 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 C6orf120Q7Z4R8 191 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 RDH10Q8IZV5 341 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 TMEM61Q8N0U2 210 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 C6orf223Q8N319 242 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 ARL10Q8N8L6 244 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 CNNM3Q8NE01 707 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 STXBP6Q8NFX7 210 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 ACER1Q8TDN7 264 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 STARD8Q92502 1023 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 POLR1EQ9GZS1 481 aaKnown RBP2.34□□□□□ -2.04
PMS1-203ENST00000409593 SMPD3Q9NY59 655 aaPredicted RBP2.34□□□□□ -2.04
PMS1-203ENST00000409593 PDS5BQ9NTI5 1447 aa2.34□□□□□ -2.04
PMS1-203ENST00000409593 IGKV1D-8A0A087WSZ0 117 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 GAKO14976 1311 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 SPAG7O75391 227 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 MXD4Q14582 209 aaPredicted RBP2.33□□□□□ -2.04
PMS1-203ENST00000409593 TIGD3Q6B0B8 471 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 CTRB2Q6GPI1 263 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 FAM71E1Q6IPT2 247 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 ZNF619Q8N2I2 560 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 OR10A7Q8NGE5 316 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 OR2L8Q8NGY9 312 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 FGF11Q92914 225 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 CCNL2Q96S94 520 aaPredicted RBP2.33□□□□□ -2.04
PMS1-203ENST00000409593 P2RY13Q9BPV8 354 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 RSPO3Q9BXY4 272 aaPredicted RBP2.33□□□□□ -2.04
PMS1-203ENST00000409593 TPK1Q9H3S4 243 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 GNPTGQ9UJJ9 305 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 TRAPPC4Q9Y296 219 aa2.33□□□□□ -2.04
PMS1-203ENST00000409593 PHF3Q92576 2039 aaKnown RBP2.32□□□□□ -2.04
PMS1-203ENST00000409593 SH3TC1Q8TE82 1336 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 TRDCB7Z8K6 153 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 F8WDY8 70 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 AGPAT2O15120 278 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 RS1O15537 224 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 H2BFMP0C1H6 154 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 CALCBP10092 127 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 POLR2EP19388 210 aaKnown RBP2.32□□□□□ -2.04
PMS1-203ENST00000409593 MAPK3P27361 379 aaPredicted RBP2.32□□□□□ -2.04
PMS1-203ENST00000409593 HSD17B7P56937 341 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 PDZK1IP1Q13113 114 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 CCDC57Q2TAC2 916 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 ZNF621Q6ZSS3 439 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 OR10G3Q8NGC4 313 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 ZNF596Q8TC21 504 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 TIMD4Q96H15 378 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 FOLH1BQ9HBA9 442 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 SLC25A37Q9NYZ2 338 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 STAP1Q9ULZ2 295 aa2.32□□□□□ -2.04
PMS1-203ENST00000409593 A0A0G2JLM5 398 aa2.31□□□□□ -2.04
PMS1-203ENST00000409593 DCTN6O00399 190 aa2.31□□□□□ -2.04
PMS1-203ENST00000409593 CXCL13O43927 109 aa2.31□□□□□ -2.04
PMS1-203ENST00000409593 PRPSAP2O60256 369 aa2.31□□□□□ -2.04
PMS1-203ENST00000409593 TRIM16O95361 564 aa2.31□□□□□ -2.04
PMS1-203ENST00000409593 LGALS2P05162 132 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms