RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 GHDCQ8N2G8 530 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 SSC4DQ8WTU2 575 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 DDIT4LQ96D03 193 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 EPYCQ99645 322 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 TMEM43Q9BTV4 400 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC6A15Q9H2J7 730 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 DCLRE1BQ9H816 532 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 SAMHD1Q9Y3Z3 626 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 GTF3C1Q12789 2109 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 A0A1B0GVC2 190 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 WIPF3A6NGB9 483 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 A8MVM7 634 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 SHISA8B8ZZ34 492 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 H3BML4 177 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 LRRTM2O43300 516 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 E2F6O75461 281 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 LYPD3O95274 346 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 THY1P04216 161 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 PEPDP12955 493 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 ARHGDIAP52565 204 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 NHSL2Q5HYW2 709 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 DCST1Q5T197 706 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 TRILQ7L0X0 811 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 NKAIN4Q8IVV8 208 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 RNF113BQ8IZP6 322 aaKnown RBP14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 LILRA2Q8N149 483 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 LINC00471Q8N535 108 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 OR5M1Q8NGP8 315 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 OR52J3Q8NH60 311 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 STK35Q8TDR2 534 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 ACOT11Q8WXI4 607 aaPredicted RBP14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 LRTOMTQ8WZ04 291 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 ABTB1Q969K4 478 aaPredicted RBP14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 RELTQ969Z4 430 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 COL12A1Q99715 3063 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 NPAS1Q99742 590 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 PRSS27Q9BQR3 290 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 ZNF426Q9BUY5 554 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 SLC19A3Q9BZV2 496 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 KLHL4Q9C0H6 718 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 KRCC1Q9NPI7 259 aaPredicted RBP14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 PLSCR2Q9NRY7 297 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 MAN2C1Q9NTJ4 1040 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 ZNF835Q9Y2P0 537 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 SLC6A5Q9Y345 797 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 ZNF337Q9Y3M9 751 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 LYVE1Q9Y5Y7 322 aa14.89□□□□□ -0.03
TSPAN4-208ENST00000409531 DOPEY2Q9Y3R5 2298 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 TMEM72A0PK05 275 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 HTR3EA5X5Y0 456 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 AQP7O14520 342 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 SLC19A2O60779 497 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 CCNA2P20248 432 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 POU3F2P20265 443 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 DNAJA1P31689 397 aaKnown RBP14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 BCL2A1Q16548 175 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 SYT14P1Q58G82 188 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 ARHGAP11AQ6P4F7 1023 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 ZNF730Q6ZMV8 503 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 SLC7A13Q8TCU3 470 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 TMEM239Q8WW34 195 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 SARAFQ96BY9 339 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 CENPNQ96H22 339 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 ALPK1Q96QP1 1244 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 C6orf203Q9P0P8 240 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 MED31Q9Y3C7 131 aa14.88□□□□□ -0.03
TSPAN4-208ENST00000409531 TRGV8A0A0C4DH27 118 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 OR14I1A6ND48 311 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 BAG2O95816 211 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 IGF2P01344 180 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 TFPIP10646 304 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 BMP7P18075 431 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 FPR1P21462 350 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 IFNGR2P38484 337 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 LIMS1P48059 325 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 CASP6P55212 293 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 FOXD4Q12950 439 aaPredicted RBP14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 RCN1Q15293 331 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 PDSS1Q5T2R2 415 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 C1QL3Q5VWW1 255 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 VASNQ6EMK4 673 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 WDR88Q6ZMY6 472 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 Q6ZPB1 254 aaPredicted RBP14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 CDK20Q8IZL9 346 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 PQLC1Q8N2U9 271 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 ATP6V1C2Q8NEY4 427 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 TMEM255BQ8WV15 326 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 NRBF2Q96F24 287 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 PSMG3-AS1Q96PY0 264 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 POTEKPQ9BYX7 375 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 HDGFL3Q9Y3E1 203 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 LIPGQ9Y5X9 500 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 U3KQV3 271 aa14.87□□□□□ -0.03
TSPAN4-208ENST00000409531 KIAA1549Q9HCM3 1950 aa14.86□□□□□ -0.03
TSPAN4-208ENST00000409531 A0A087WUU8 490 aa14.86□□□□□ -0.03
TSPAN4-208ENST00000409531 A0A1B0GTH9 108 aa14.86□□□□□ -0.03
TSPAN4-208ENST00000409531 SH3PXD2BA1X283 911 aa14.86□□□□□ -0.03
TSPAN4-208ENST00000409531 H0Y3Z8 333 aa14.86□□□□□ -0.03
TSPAN4-208ENST00000409531 OR2T1O43869 369 aa14.86□□□□□ -0.03
TSPAN4-208ENST00000409531 EFNA2O43921 213 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms