RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 IFNGR1P15260 489 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 CCR4P51679 360 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 SLC16A1P53985 500 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 PRPS1P60891 318 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 ZNF678Q5SXM1 525 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 C1orf229Q6ZS94 237 aaPredicted RBP11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 MGARPQ8TDB4 240 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 WDR60Q8WVS4 1066 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 NEU4Q8WWR8 484 aaPredicted RBP11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 JADE3Q92613 823 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 CDS1Q92903 461 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 TMEM237Q96Q45 408 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 LPAR2Q9HBW0 351 aa11.15□□□□□ -0.62
CHRNA1-203ENST00000409219 SERTM1A2A2V5 107 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 LYNX1G3V0Z9 82 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 H3BNH8 94 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 GTPBP1O00178 669 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 GPR171O14626 319 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 KLF11O14901 512 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 SNX3O60493 162 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 SPAG7O75391 227 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 WNT11O96014 354 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 IGFBP1P08833 259 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 LYNX1P0DP58 116 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 KRT4P19013 534 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 TAC1P20366 129 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 ATP6V1C1P21283 382 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 FRKP42685 505 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 KHKP50053 298 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 SERPINB9P50453 376 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 HIKESHIQ53FT3 197 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 C1QTNF12Q5T7M4 302 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 TSPO2Q5TGU0 170 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 KLHL24Q6TFL4 600 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 C4orf33Q8N1A6 199 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 ZNF614Q8N883 585 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 OR5W2Q8NH69 310 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 CLDND2Q8NHS1 167 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 PIGXQ8TBF5 258 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 MRPL24Q96A35 216 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 DNAJA3Q96EY1 480 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 SLC38A2Q96QD8 506 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 KCNS3Q9BQ31 491 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 KATNB1Q9BVA0 655 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 ESM1Q9NQ30 184 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 DUSP22Q9NRW4 184 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 MKS1Q9NXB0 559 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 UPB1Q9UBR1 384 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 GRIP1Q9Y3R0 1128 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 NOTCH1P46531 2555 aa11.14□□□□□ -0.63
CHRNA1-203ENST00000409219 NPIPB9F8W1W9 429 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 CRYAAP02489 173 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 MSMBP08118 114 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 SNRPAP09012 282 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 UBL4AP11441 157 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 FOXA1P55317 472 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 TGFBR3Q03167 851 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 CBFBQ13951 182 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 HIST2H2BDQ6DRA6 164 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 CDC73Q6P1J9 531 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 ZCCHC12Q6PEW1 402 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 ZDHHC22Q8N966 263 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 ZFP28Q8NHY6 868 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 UBASH3BQ8TF42 649 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 ZNF764Q96H86 408 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 APOPT1Q96IL0 206 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 ARL5BQ96KC2 179 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 LRRC37BQ96QE4 947 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 STACQ99469 402 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 NARFLQ9H6Q4 476 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 FGFR1OP2Q9NVK5 253 aa11.13□□□□□ -0.63
CHRNA1-203ENST00000409219 hCG_2039718K7EN88 272 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ZNF264O43296 627 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ENO1P06733 434 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ERCC1P07992 297 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 DDX5P17844 614 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 MPGP29372 298 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 CALCRP30988 508 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SLC1A3P43003 542 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ATP12AP54707 1039 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SESN3P58005 492 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 NAAAQ02083 359 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 MERTKQ12866 999 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SKP2Q13309 424 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 LASP1Q14847 261 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ADRM1Q16186 407 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 IMPG1Q17R60 797 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 DCST2Q5T1A1 773 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 NOXRED1Q6NXP6 359 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 TIFABQ6ZNK6 161 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 CCDC121Q6ZUS5 278 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 LSRQ86X29 649 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 CARM1Q86X55 608 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SLC25A43Q8WUT9 341 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ST8SIA1Q92185 356 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ZHX1-C8orf76Q96EF9 292 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 FAM120BQ96EK7 910 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms