RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ADAM18Q9Y3Q7 739 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 DPM1O60762 260 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 LY6G5CQ5SRR4 150 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 LHFPL5Q8TAF8 219 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 OR7D2Q96RA2 312 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 MARVELD1Q9BSK0 173 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 CXorf36Q9H7Y0 433 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 HHLA2Q9UM44 414 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 TRAV27A0A087WT01 109 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 CIB4A0PJX0 185 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 PAPLNO95428 1278 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 MPIG6BO95866 241 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 BDH1Q02338 343 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 OR4N5Q8IXE1 308 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 SLC38A6Q8IZM9 456 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 CCDC71LQ8N9Z2 235 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 OR14A2Q96R54 314 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 INTS14Q96SY0 518 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 SMIM3Q9BZL3 60 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 SIDT1Q9NXL6 827 aaKnown RBP16.48■□□□□ 0.23
SMPD4-202ENST00000409031 NME2P22392 152 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 HOXD9P28356 352 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-202ENST00000409031 PUS10Q3MIT2 529 aaKnown RBP16.48■□□□□ 0.23
SMPD4-202ENST00000409031 OVCH1Q7RTY7 1134 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 MAMDC2Q7Z304 686 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-202ENST00000409031 CMIPQ8IY22 773 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 PRSS58Q8IYP2 241 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 OR6N1Q8NGY5 312 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 FIBINQ8TAL6 211 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 LKAAEAR1Q8TD35 194 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 IRF7Q92985 503 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 GPR62Q9BZJ7 368 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 MYEF2Q9P2K5 600 aaKnown RBP16.48■□□□□ 0.23
SMPD4-202ENST00000409031 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 LEUTXA8MZ59 168 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 ZBTB42B2RXF5 422 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 UBL4AP11441 157 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 ADH5P11766 374 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 NDUFA6P56556 154 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 OR4K17Q8NGC6 315 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 OR52I2Q8NH67 350 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 HOXB13Q92826 284 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-202ENST00000409031 TGIF2Q9GZN2 237 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 TUBG2Q9NRH3 451 aa16.48■□□□□ 0.23
SMPD4-202ENST00000409031 DSCR3O14972 297 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 TSPAN12O95859 305 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 CPT2P23786 658 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 SERPINF1P36955 418 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 SLC26A5P58743 744 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 GAB1Q13480 694 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 ARHGAP19Q14CB8 494 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 PDSS1Q5T2R2 415 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 PLA2G15Q8NCC3 412 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 OR6T1Q8NGN1 323 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 OR1A2Q9Y585 309 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 PLCH1Q4KWH8 1693 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 UBE2IP63279 158 aaKnown RBP16.47■□□□□ 0.23
SMPD4-202ENST00000409031 TMEM244Q5VVB8 128 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 FBXL12Q9NXK8 326 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 ZNF225Q9UK10 706 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 ZNF443Q9Y2A4 671 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-202ENST00000409031 TNFRSF10BO14763 440 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 MGMTP16455 207 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 SLC2A5P22732 501 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 EIF2B1Q14232 305 aaKnown RBP16.47■□□□□ 0.23
SMPD4-202ENST00000409031 OR1Q1Q15612 314 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 ACOT7LQ6ZUV0 252 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 SLC30A7Q8NEW0 376 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 ASB13Q8WXK3 278 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 ARHGAP9Q9BRR9 750 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 SYT7O43581 403 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 RAG2P55895 527 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 GPR85P60893 370 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 CALHM3Q86XJ0 350 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 ZNF561Q8N587 486 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 OR2A12Q8NGT7 310 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 SLC2A12Q8TD20 617 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 HERVK_113Q902F9 699 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 PDXPQ96GD0 296 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 UBQLN3Q9H347 655 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 RNF215Q9Y6U7 377 aa16.47■□□□□ 0.23
SMPD4-202ENST00000409031 HOXB5P09067 269 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 AKR1C2P52895 323 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 CLDN6P56747 220 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 AKR1C1Q04828 323 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 YIPF5Q969M3 257 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 RAB7BQ96AH8 199 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 SLC6A17Q9H1V8 727 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 ADAM29Q9UKF5 820 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 CSNK1DP48730 415 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 ACSM5Q6NUN0 579 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.23
SMPD4-202ENST00000409031 ACOT4Q8N9L9 421 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 RAB3CQ96E17 227 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 TJP1Q07157 1748 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 PNMTP11086 282 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 SRMP19623 302 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 TMEM88Q6PEY1 159 aa16.46■□□□□ 0.23
SMPD4-202ENST00000409031 SLCO4C1Q6ZQN7 724 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms