RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NCMAPQ5T1S8 102 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 NIPAL3Q6P499 406 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 ZNF813Q6ZN06 617 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 DPPA4Q7L190 304 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 FCRLAQ7L513 359 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 SZRD1Q7Z422 152 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 ZNF561Q8N587 486 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 ARRDC1Q8N5I2 433 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 C1orf216Q8TAB5 229 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 TMEM169Q96HH4 297 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 HCAR1Q9BXC0 346 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 PDGFDQ9GZP0 370 aaPredicted RBP11.83□□□□□ -0.52
HERC3-203ENST00000407637 ALX4Q9H161 411 aaPredicted RBP11.83□□□□□ -0.52
HERC3-203ENST00000407637 TMPRSS5Q9H3S3 457 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 CHMP1AQ9HD42 196 aaPredicted RBP11.83□□□□□ -0.52
HERC3-203ENST00000407637 SMCO4Q9NRQ5 59 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 TNFSF18Q9UNG2 199 aa11.83□□□□□ -0.52
HERC3-203ENST00000407637 A0A1B0GWJ7 208 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CDHR4A6H8M9 788 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 RNF222A6NCQ9 220 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 ARL5CA6NH57 179 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 F5H0A9 414 aaPredicted RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 CACNB4O00305 520 aaPredicted RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 RHOCP08134 193 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 MMP3P08254 477 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 HOXC4P09017 264 aaPredicted RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 SMIM10L2AP0DMW4 78 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SMIM10L2BP0DMW5 78 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 RCC1P18754 421 aaPredicted RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 CD53P19397 219 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 PYCR1P32322 319 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 HTR5AP47898 357 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 TAS2R41P59536 307 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 TAS2R60P59551 318 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 ARF5P84085 180 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 HSPB3Q12988 150 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CHAF1BQ13112 559 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CLINT1Q14677 625 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 FAM76BQ5HYJ3 339 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 LYPLAL1Q5VWZ2 237 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 GLT8D1Q68CQ7 371 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 EID2Q8N6I1 236 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 OR4C16Q8NGL9 310 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 KLK6Q92876 244 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 OSTF1Q92882 214 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CLP1Q92989 425 aaKnown RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 TEX12Q9BXU0 123 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CHST6Q9GZX3 395 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 LAT2Q9GZY6 243 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 MYNNQ9NPC7 610 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 PCDHGA1Q9Y5H4 931 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 A0A0C4DFX4 3053 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CLDN11O75508 207 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SLC34A2O95436 690 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CPT2P23786 658 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 AVPR2P30518 371 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 MNDAP41218 407 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 OMPP47874 163 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SGSHP51688 502 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SLC16A1P53985 500 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 NRG3P56975 720 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SSX6Q7RTT6 188 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 THEM5Q8N1Q8 247 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 GTPBP8Q8N3Z3 284 aaPredicted RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 ZNF383Q8NA42 475 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 TEX19Q8NA77 164 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 POMGNT2Q8NAT1 580 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 CA5BP1Q8WTZ4 195 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SNX33Q8WV41 574 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SLAMF9Q96A28 289 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 MARS2Q96GW9 593 aaKnown RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 OR14A2Q96R54 314 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 NRIP2Q9BQI9 281 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 SLC25A18Q9H1K4 315 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 FOXJ3Q9UPW0 622 aa11.82□□□□□ -0.52
HERC3-203ENST00000407637 FCF1Q9Y324 198 aaKnown RBP11.82□□□□□ -0.52
HERC3-203ENST00000407637 URADA6NGE7 173 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 A6NLC8 198 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CPSF4LA6NMK7 179 aaKnown RBP11.81□□□□□ -0.52
HERC3-203ENST00000407637 OR2AT4A6NND4 320 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 H3BNC9 293 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 FGF16O43320 207 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 OR2F2O95006 317 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 IGLV3-27P01718 113 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SFTPCP11686 197 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CDH4P55283 916 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CDC42EP1Q00587 391 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
HERC3-203ENST00000407637 OR2F1Q13607 317 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 ZNF345Q14585 488 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CCSMST1Q4G0I0 132 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 CYB5R2Q6BCY4 276 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 DMKNQ6E0U4 476 aaPredicted RBP11.81□□□□□ -0.52
HERC3-203ENST00000407637 FAM83HQ6ZRV2 1179 aaPredicted RBP11.81□□□□□ -0.52
HERC3-203ENST00000407637 C6orf120Q7Z4R8 191 aa11.81□□□□□ -0.52
HERC3-203ENST00000407637 SLC43A2Q8N370 569 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms