RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TMED7-TICAM2A0A0A6YYA0 188 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 IGHV1OR15-9A0A0B4J2B8 117 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TRDV1A0A1B0GX56 115 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SUSD5O60279 629 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 EFEMP2O95967 443 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 PTHP01270 115 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 MAOAP21397 527 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ITGA3P26006 1051 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 HMGA2P52926 109 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 GPR50Q13585 617 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FGL2Q14314 439 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SPCS2Q15005 226 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR7A5Q15622 319 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TP53I3Q53FA7 332 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 EMC4Q5J8M3 183 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 NKAIN2Q5VXU1 208 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM71Q6P5X7 295 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM92Q6UXU6 159 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF620Q6ZNG0 422 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 Q6ZS52 159 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CCDC36Q8IYA8 594 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 UBE2J2Q8N2K1 259 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR2L13Q8N349 312 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ZSCAN1Q8NBB4 408 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC37A3Q8NCC5 494 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR52I1Q8NGK6 324 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 BRIX1Q8TDN6 353 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM255BQ8WV15 326 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 GAB3Q8WWW8 586 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 RELTQ969Z4 430 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FAM46BQ96A09 425 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FOXRED1Q96CU9 486 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR5B2Q96R09 309 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF587Q96SQ5 575 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 KATNB1Q9BVA0 655 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TTYH1Q9H313 450 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CHMP1AQ9HD42 196 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 BOKQ9UMX3 212 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC7A11Q9UPY5 501 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TMED7Q9Y3B3 224 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TPRP12270 2363 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TNFSF14O43557 240 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SIGLEC6O43699 453 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 NKX2-2O95096 273 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 IGHG1P01857 330 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 STARP49675 285 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SSR4P51571 173 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 PNLIPRP2P54317 469 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 EMP3P54852 163 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ACTBP60709 375 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ACTG1P63261 375 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC35A1P78382 337 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 EEF1A2Q05639 463 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 DNASE1L3Q13609 305 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CRMP1Q14194 572 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 EIF2B1Q14232 305 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 EEF1A1P5Q5VTE0 462 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF793Q6ZN11 406 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 UTS2BQ765I0 119 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CDH24Q86UP0 819 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 IGFN1Q86VF2 1251 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 RBM45Q8IUH3 476 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FTMTQ8N4E7 242 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 NANOGP1Q8N7R0 232 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR4F15Q8NGB8 312 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR51L1Q8NGJ5 315 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR13C3Q8NGS6 347 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SPTSSAQ969W0 71 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM41AQ96HV5 264 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 C4orf36Q96KX1 117 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF350Q9GZX5 532 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ABCG5Q9H222 651 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC38A1Q9H2H9 487 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 NIPAL2Q9H841 368 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 PADI1Q9ULC6 663 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 HHLA2Q9UM44 414 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TEX13CA0A0J9YWL9 993 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SMIM30A4D0T7 59 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FRG2CA6NGY1 282 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FAM183AA6NL82 134 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FAM25EA8MYX2 175 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FTCDNL1E5RQL4 147 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 EEF1E1O43324 174 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC16A7O60669 478 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 LILRB5O75023 590 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ADAM23O75077 832 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FASLGP48023 281 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CSNK1A1P48729 337 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 PITPNBP48739 271 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 MTNR1BP49286 362 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 P2RX1P51575 399 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 PCBP3P57721 371 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 NXPH1P58417 271 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SNTB2Q13425 540 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TRA2AQ13595 282 aaKnown RBP eCLIP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CARTPTQ16568 116 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 NKG7Q16617 165 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CLPPQ16740 277 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms