RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 FGFBP1Q14512 234 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 LINC01590Q5TEZ4 76 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 RPL13AP3Q6NVV1 102 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 MZT2BQ6NZ67 158 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 FAM199XQ6PEV8 388 aaPredicted RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 SAMD14Q8IZD0 417 aaPredicted RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 OR52L1Q8NGH7 329 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 RFT1Q96AA3 541 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 SLC22A18Q96BI1 424 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ZMYND19Q96E35 227 aaPredicted RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 GPR137Q96N19 417 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ZNF559Q9BR84 538 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 MFRPQ9BY79 579 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 FOLH1BQ9HBA9 442 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 CACNG2Q9Y698 323 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 CEP290O15078 2479 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FRYLO94915 3013 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 A0A1W2PRG6 482 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FAM25AB3EWG3 89 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FAM25CB3EWG5 89 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FAM25GB3EWG6 89 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 INMT-MINDY4F8WBC2 141 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 RCBTB2O95199 551 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 WISP1O95388 367 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 CT45A8P0DMV1 189 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 CT45A9P0DMV2 189 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 HOXB2P14652 356 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 CSRP1P21291 193 aaKnown RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 F8A1P23610 371 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 RPS15P62841 145 aaKnown RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 CT45A2Q5DJT8 189 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 BCL2L15Q5TBC7 163 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 ZNF761Q86XN6 746 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 OR51L1Q8NGJ5 315 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 SLC2A12Q8TD20 617 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 GPBAR1Q8TDU6 330 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 SLC25A38Q96DW6 304 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 IGFLR1Q9H665 355 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 AUNIPQ9H7T9 357 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 POLE3Q9NRF9 147 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 WSB2Q9NYS7 404 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 F5P12259 2224 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 A0A1W2PPK0 400 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 OR6C68A6NDL8 312 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 NOTOA8MTQ0 251 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 RDH16O75452 317 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 RASGRP1O95267 797 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 WNT1P04628 370 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 SAGP10523 405 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 PAICSP22234 425 aaKnown RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 RBM34P42696 430 aaKnown RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 MMP15P51511 669 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 IGLV3-21P80748 117 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 DMWDQ09019 674 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 ZNF141Q15928 474 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 BTBD16Q32M84 506 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FNDC7Q5VTL7 733 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FAM205BPQ63HN1 556 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 PLCZ1Q86YW0 608 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 GHDCQ8N2G8 530 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 PIAS4Q8N2W9 510 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 SLC44A3Q8N4M1 653 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 CAMKVQ8NCB2 501 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 DEDD2Q8WXF8 326 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 AKAP1Q92667 903 aaKnown RBP eCLIP9.03□□□□□ -0.96
MSH2-202ENST00000406134 LMF1Q96S06 567 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 H2AFY2Q9P0M6 372 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 TMEM184BQ9Y519 407 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 SELENOFO60613 162 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 IGHV4-34P06331 123 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 PYCR1P32322 319 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 ATP6V1E1P36543 226 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FAM209AQ5JX71 171 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 GPALPP1Q8IXQ4 340 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 CMIPQ8IY22 773 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 C7orf61Q8IZ16 206 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 LRRC75AQ8NAA5 344 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 DERL3Q96Q80 235 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 C1QTNF7Q9BXJ2 289 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 RBCK1Q9BYM8 510 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 KRCC1Q9NPI7 259 aaPredicted RBP9.03□□□□□ -0.96
MSH2-202ENST00000406134 TMEM5Q9Y2B1 443 aa9.03□□□□□ -0.96
MSH2-202ENST00000406134 FREM2Q5SZK8 3169 aa9.02□□□□□ -0.96
MSH2-202ENST00000406134 VPS13AQ96RL7 3174 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 TNFRSF10CO14798 259 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 CD3GP09693 182 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 ST6GAL1P15907 406 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 CTHP32929 405 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 HTR2BP41595 481 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 RAB38P57729 211 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 DEFB110Q30KQ9 67 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 SIAH3Q8IW03 269 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 RCBTB1Q8NDN9 531 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 OR52E2Q8NGJ4 325 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 OR9A4Q8NGU2 314 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 OR14A16Q8NHC5 309 aa9.02□□□□□ -0.97
MSH2-202ENST00000406134 SLC37A2Q8TED4 501 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms