RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 A0A1W2PNR3 127 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 CLCA1A8K7I4 914 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 hCG_2039718K7EN88 272 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 FFAR1O14842 300 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 PRSS23O95084 383 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 EIF1AXP47813 144 aaKnown RBP26.34■■□□□ 1.81
USP42-202ENST00000404008 IQCCQ4KMZ1 466 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 PDSS1Q5T2R2 415 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 ZNF845Q96IR2 970 aaPredicted RBP26.34■■□□□ 1.81
USP42-202ENST00000404008 ZNF300Q96RE9 604 aaPredicted RBP26.34■■□□□ 1.81
USP42-202ENST00000404008 IL1RAPQ9NPH3 570 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 PAQR5Q9NXK6 330 aaPredicted RBP26.34■■□□□ 1.81
USP42-202ENST00000404008 HDGFL3Q9Y3E1 203 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 MYO18BQ8IUG5 2567 aa26.34■■□□□ 1.81
USP42-202ENST00000404008 KDM4EB2RXH2 506 aaPredicted RBP26.33■■□□□ 1.81
USP42-202ENST00000404008 NPIPB7O75200 414 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 THRBP10828 461 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 EGR4Q05215 589 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 MYBPHQ13203 477 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 RPTNQ6XPR3 784 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 WDR88Q6ZMY6 472 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 CHMP1BQ7LBR1 199 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 CYP4Z1Q86W10 505 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 OFCC1Q8IZS5 231 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 STK35Q8TDR2 534 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 UCN2Q96RP3 112 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 TRIB1Q96RU8 372 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 PRSS27Q9BQR3 290 aa26.33■■□□□ 1.81
USP42-202ENST00000404008 IGKV1D-42A0A075B6H8 117 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 J3QKU1 62 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 CXCL13O43927 109 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 FABP3P05413 133 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 ITGA2P17301 1181 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 RHCEP18577 417 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 CARD18P57730 90 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 C1orf146Q5VVC0 180 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 SPATA24Q86W54 205 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 RPRMLQ8N4K4 120 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 OSTF1Q92882 214 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 MPP4Q96JB8 637 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 ZNF426Q9BUY5 554 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 POTEKPQ9BYX7 375 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 CLCF1Q9UBD9 225 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 MEMO1Q9Y316 297 aa26.33■■□□□ 1.8
USP42-202ENST00000404008 TCRBV3S1A0A5B6 114 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 CD8B2A6NJW9 211 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 E9PLN8 166 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 CIB2O75838 187 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 IFNA8P32881 189 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 DIO1P49895 249 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 ST3GAL3Q11203 375 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 SGCBQ16585 318 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 FAM98BQ52LJ0 330 aaKnown RBP26.32■■□□□ 1.8
USP42-202ENST00000404008 NSUN5P2Q63ZY6 315 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 B3GNT6Q6ZMB0 384 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 TMPPEQ6ZT21 453 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 ZDHHC21Q8IVQ6 265 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 ADGRG5Q8IZF4 528 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 DNAJA3Q96EY1 480 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 VKORC1Q9BQB6 163 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 TMEM43Q9BTV4 400 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 FNDC11Q9BVV2 318 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 SRXN1Q9BYN0 137 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 CALHM2Q9HA72 323 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 RHCGQ9UBD6 479 aa26.32■■□□□ 1.8
USP42-202ENST00000404008 FAM32AQ9Y421 112 aaKnown RBP26.32■■□□□ 1.8
USP42-202ENST00000404008 A0A1B0GUH1 482 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 DHRS12A0PJE2 317 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 CCL21O00585 134 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 PMS2P2O95744 297 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 UMPSP11172 480 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 FUT4P22083 530 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 MAGEA2P43356 314 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 C4orf17Q53FE4 359 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 C1orf140Q5VVS0 124 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 C5orf46Q6UWT4 87 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 PIWIL3Q7Z3Z3 882 aaKnown RBP26.31■■□□□ 1.8
USP42-202ENST00000404008 DMRTA2Q96SC8 542 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 TIGARQ9NQ88 270 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 MAN2C1Q9NTJ4 1040 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 TRAPPC4Q9Y296 219 aa26.31■■□□□ 1.8
USP42-202ENST00000404008 HIVEP3Q5T1R4 2406 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 SULT2B1O00204 365 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 LRRTM2O43300 516 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 DIRAS1O95057 198 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 GPIP06744 558 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 IMPDH2P12268 514 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 RAC3P60763 192 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 CSNK2A1P68400 391 aaPredicted RBP26.3■■□□□ 1.8
USP42-202ENST00000404008 CHRNB3Q05901 458 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 PLXDC2Q6UX71 529 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 FJX1Q86VR8 437 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 P3H2Q8IVL5 708 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 NKAIN4Q8IVV8 208 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 MARVELD2Q8N4S9 558 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 CANT1Q8WVQ1 401 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 CPNE4Q96A23 557 aaPredicted RBP26.3■■□□□ 1.8
USP42-202ENST00000404008 KTI12Q96EK9 354 aaPredicted RBP26.3■■□□□ 1.8
USP42-202ENST00000404008 PIP5K1AQ99755 562 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 TTYH2Q9BSA4 534 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms