RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 C19orf57Q0VDD7 668 aa29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 C1QL3Q5VWW1 255 aa29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 TTC33Q6PID6 262 aaPredicted RBP29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 WDYHV1Q96HA8 205 aa29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 OR5B2Q96R09 309 aa29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 S100A14Q9HCY8 104 aa29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 U3KQV3 271 aa29.95■■■□□ 2.39
CSNK1E-204ENST00000403904 A0A0J9YW62 118 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 TRBV4-1A0A0J9YWV2 114 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 A0A1W2PNR3 127 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 OR14I1A6ND48 311 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 EIF1AYO14602 144 aaKnown RBP29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 GNGT2O14610 69 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 PTGS2P35354 604 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 SMIM11AP58511 58 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 LSM11P83369 360 aaKnown RBP eCLIP29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 BCL2A1Q16548 175 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 ZNF843Q8N446 348 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 TMEM239Q8WW34 195 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 KLHL15Q96M94 604 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 ANKRD19PQ9H560 264 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 LYVE1Q9Y5Y7 322 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 GJE1A6NN92 205 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 KPNA4O00629 521 aaPredicted RBP29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 KRT36O76013 467 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 FKBP2P26885 142 aaKnown RBP29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 UGT2B15P54855 530 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 PODNL1Q6PEZ8 512 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 TBPL2Q6SJ96 375 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 STK35Q8TDR2 534 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 LRTOMTQ8WZ04 291 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 KTI12Q96EK9 354 aaPredicted RBP29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 TMEM43Q9BTV4 400 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 REEP1Q9H902 201 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 DNAJB9Q9UBS3 223 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 CAMK2AQ9UQM7 478 aa29.94■■■□□ 2.38
CSNK1E-204ENST00000403904 FAM208BQ5VWN6 2430 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 A0A087WUU8 490 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 B8ZZF3 427 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 TNFRSF11BO00300 401 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 TNFSF11O14788 317 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 CLOCKO15516 846 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 NPIPB7O75200 414 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 C1QL1O75973 258 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 CPN1P15169 458 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 RBM34P42696 430 aaKnown RBP29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 CTU2Q2VPK5 515 aaKnown RBP29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 OR5M9Q8NGP3 310 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 HS6ST2Q96MM7 605 aa29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 SAMHD1Q9Y3Z3 626 aaKnown RBP29.93■■■□□ 2.38
CSNK1E-204ENST00000403904 FASP25445 335 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 MYBPHQ13203 477 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 C1orf140Q5VVS0 124 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 ZNF730Q6ZMV8 503 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 ESPNLQ6ZVH7 1005 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 MEIOBQ8N635 442 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 ACOT11Q8WXI4 607 aaPredicted RBP29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 ALPK1Q96QP1 1244 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 FUZQ9BT04 418 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 PRDM14Q9GZV8 571 aa29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 MEPEQ9NQ76 525 aaPredicted RBP29.92■■■□□ 2.38
CSNK1E-204ENST00000403904 DEAF1O75398 565 aaPredicted RBP29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 RPS5P46782 204 aaKnown RBP29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 CLK1P49759 484 aaKnown RBP29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 HMGA2P52926 109 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 IST1P53990 364 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 SEC23BQ15437 767 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 EXOC3L2Q2M3D2 409 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 WLSQ5T9L3 541 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 PRICKLE2Q7Z3G6 844 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 PFN4Q8NHR9 129 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 ADGRG7Q96K78 797 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 POTEKPQ9BYX7 375 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 COQ10BQ9H8M1 238 aa29.91■■■□□ 2.38
CSNK1E-204ENST00000403904 PIP5K1CO60331 668 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 LDLRP01130 860 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 FCGR1AP12314 374 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 ABOP16442 354 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 LIMS1P48059 325 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 ATP6AP1Q15904 470 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 AMIGO2Q86SJ2 522 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 ST6GALNAC3Q8NDV1 305 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 PNPLA3Q9NST1 481 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 ALKBH4Q9NXW9 302 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 MED31Q9Y3C7 131 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 HDGFL3Q9Y3E1 203 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 RP1L1Q8IWN7 2480 aaPredicted RBP29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 EIF4E1BA6NMX2 242 aaKnown RBP29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 H0YHG0 523 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 BCKDKO14874 412 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 TPOP07202 933 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 EIF1AXP47813 144 aaKnown RBP29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 GXYLT1Q4G148 440 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 HMBOX1Q6NT76 420 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 OR4C15Q8NGM1 316 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 OR2V1Q8NHB1 315 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 TAAR8Q969N4 342 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 PTDSS2Q9BVG9 487 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 SLC19A3Q9BZV2 496 aa29.9■■■□□ 2.38
CSNK1E-204ENST00000403904 NTN4Q9HB63 628 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms