RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 LSM14AQ8ND56 463 aaKnown RBP17.15■□□□□ 0.34
USP48-204ENST00000400301 OR4M2Q8NGB6 313 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 FYTTD1Q96QD9 318 aaKnown RBP17.15■□□□□ 0.34
USP48-204ENST00000400301 MAP3K3Q99759 626 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 RDH8Q9NYR8 311 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 V9GY05 133 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 ENDOUP21128 410 aaKnown RBP17.15■□□□□ 0.34
USP48-204ENST00000400301 FRKP42685 505 aaPredicted RBP17.15■□□□□ 0.34
USP48-204ENST00000400301 CRYBB2P43320 205 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 RIDAP52758 137 aaKnown RBP17.15■□□□□ 0.34
USP48-204ENST00000400301 FGFBP1Q14512 234 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 ADAMTS14Q8WXS8 1223 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 ISYNA1Q9NPH2 558 aa17.15■□□□□ 0.34
USP48-204ENST00000400301 CREBL2O60519 120 aaPredicted RBP17.14■□□□□ 0.33
USP48-204ENST00000400301 HEXBP07686 556 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 ARSBP15848 533 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 OR10A5Q9H207 317 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 CMC2Q9NRP2 79 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 TBC1D24Q9ULP9 559 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 ASCC3Q8N3C0 2202 aaKnown RBP17.14■□□□□ 0.33
USP48-204ENST00000400301 FAM221BA6H8Z2 402 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 CSF3P09919 207 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 CD6P30203 668 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 HTR3AP46098 478 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 CDK5Q00535 292 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 OR4K17Q8NGC6 315 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 OR51Q1Q8NH59 317 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 GPR148Q8TDV2 347 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 CRISPLD2Q9H0B8 497 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 TRPV4Q9HBA0 871 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 TMEM72A0PK05 275 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 GPRIN2O60269 458 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 LILRB5O75023 590 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 TRHRP34981 398 aaPredicted RBP17.14■□□□□ 0.33
USP48-204ENST00000400301 CLDN12P56749 244 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 ARFRP1Q13795 201 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 SHHQ15465 462 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 GPAT4Q86UL3 456 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 PLXDC1Q8IUK5 500 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 SNAPC3Q92966 411 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 OR14A2Q96R54 314 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 REV1Q9UBZ9 1251 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 MAB21L2Q9Y586 359 aa17.14■□□□□ 0.33
USP48-204ENST00000400301 TRAV18A0A075B6X5 111 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ZNF217O75362 1048 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 KCNK2O95069 426 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 VAMP1P23763 118 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ETV6P41212 452 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 VASPP50552 380 aaPredicted RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 ARTNQ5T4W7 220 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 KIAA0895LQ68EN5 471 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 SLC18B1Q6NT16 456 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 GALNTL5Q7Z4T8 443 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 UBE3DQ7Z6J8 389 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 FRMD1Q8N878 549 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 IL17RCQ8NAC3 791 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 OR4Q3Q8NH05 313 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 MRGPRX1Q96LB2 322 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 RPP25Q9BUL9 199 aaKnown RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 ALG12Q9BV10 488 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 SEMA6CQ9H3T2 930 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 GALNT9Q9HCQ5 603 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 GMEB2Q9UKD1 530 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 IFITM3Q01628 133 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 GALEQ14376 348 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 PRAMEF17Q5VTA0 474 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 FCRLAQ7L513 359 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ARMC10Q8N2F6 343 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ZNF511Q8NB15 262 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 SMAP2Q8WU79 429 aaPredicted RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 DIO2Q92813 273 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 FOXN4Q96NZ1 517 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ARHGDIGQ99819 225 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 NOP16Q9Y3C1 178 aaKnown RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 CTNSO60931 367 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 LDOC1O95751 146 aaPredicted RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 H2BFMP0C1H6 154 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ELK1P19419 428 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ZNF41P51814 821 aaPredicted RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 TMEM201Q5SNT2 666 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 SHISA6Q6ZSJ9 500 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ZNF767PQ75MW2 155 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 FTMTQ8N4E7 242 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 LILRB4Q8NHJ6 448 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 LMF1Q96S06 567 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 C6orf106Q9H6K1 298 aaPredicted RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 LMAN1LQ9HAT1 526 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 EPHA6Q9UF33 1036 aa17.13■□□□□ 0.33
USP48-204ENST00000400301 ATXN7L1Q9ULK2 861 aaPredicted RBP17.13■□□□□ 0.33
USP48-204ENST00000400301 H7C1C5 153 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 GALR3O60755 368 aaPredicted RBP17.12■□□□□ 0.33
USP48-204ENST00000400301 MAOAP21397 527 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 LCN6P62502 163 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 LYPD4Q6UWN0 246 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 PLCZ1Q86YW0 608 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 ARL14Q8N4G2 192 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 INTS14Q96SY0 518 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 IL20Q9NYY1 176 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 SCP2D1Q9UJQ7 156 aa17.12■□□□□ 0.33
USP48-204ENST00000400301 A0A1W2PS29 197 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms