RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SCAND1P57086 179 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 TLE3Q04726 772 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 RELQ04864 619 aaPredicted RBP9.32□□□□□ -0.92
PTPRM-203ENST00000400060 ACSM1Q08AH1 577 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 RBM39Q14498 530 aaKnown RBP9.32□□□□□ -0.92
PTPRM-203ENST00000400060 TOMM34Q15785 309 aaPredicted RBP9.32□□□□□ -0.92
PTPRM-203ENST00000400060 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 ARSIQ5FYB1 569 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 RTL6Q6ICC9 239 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 C6orf120Q7Z4R8 191 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 SFXN5Q8TD22 340 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 ORAI1Q96D31 301 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 TRMT2BQ96GJ1 504 aaKnown RBP9.32□□□□□ -0.92
PTPRM-203ENST00000400060 PIGQQ9BRB3 760 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 RHNO1Q9BSD3 238 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 SLC12A9Q9BXP2 914 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 GPR61Q9BZJ8 451 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 GOLGA2P5Q9HBQ8 144 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 RXFP3Q9NSD7 469 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 SLC25A37Q9NYZ2 338 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 LAMP5Q9UJQ1 280 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 DHDHQ9UQ10 334 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
PTPRM-203ENST00000400060 A0A0G2JLL6 359 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 TSPAN11A1L157 253 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 GLTPD2A6NH11 291 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 K7EPK0 472 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 TREHO43280 583 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 LDB2O43679 373 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 MRPL3P09001 348 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ATXN1LP0C7T5 689 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 DRD2P14416 443 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 RAB5AP20339 215 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ACRV1P26436 265 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ECI1P42126 302 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 TARBP2Q15633 366 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 NKG7Q16617 165 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 GUCA2BQ16661 112 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 OTUD1Q5VV17 481 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 WDR88Q6ZMY6 472 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 PRRT2Q7Z6L0 340 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 FAM71E2Q8N5Q1 922 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 MFSD9Q8NBP5 474 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 OR4K1Q8NGD4 311 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 LPPQ93052 612 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 FAM46AQ96IP4 442 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 C4orf36Q96KX1 117 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 DNMT3BQ9UBC3 853 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 FTSJ1Q9UET6 329 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 KLF15Q9UIH9 416 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 SIPA1L3O60292 1781 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 GAAP10253 952 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ACP5P13686 325 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ABOP16442 354 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 TNFRSF1BP20333 461 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ATP5A1P25705 553 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ITGB8P26012 769 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 CASP9P55211 416 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 CXADRP78310 365 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 LCTLQ6UWM7 567 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 UNQ6126/PRO20091Q6UXV3 157 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 FCRLAQ7L513 359 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ABI3BPQ7Z7G0 1075 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 AMIGO3Q86WK7 504 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 BPIFB2Q8N4F0 458 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 KDF1Q8NAX2 398 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 GPER1Q99527 375 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 OR11A1Q9GZK7 315 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 OR2AG1Q9H205 316 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 SEC61A2Q9H9S3 476 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 YARS2Q9Y2Z4 477 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 MYH9P35579 1960 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 SFTPCP11686 197 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ADRB3P13945 408 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 CXCR1P25024 350 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 CCKARP32238 428 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF41P51814 821 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 NFATC2Q13469 925 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 FIGNL1Q6PIW4 674 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 AGTRAPQ6RW13 159 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 HFE2Q6ZVN8 426 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 GALNTL5Q7Z4T8 443 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 TRAPPC5Q8IUR0 188 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 LILRB2Q8N423 598 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 FNDC9Q8TBE3 224 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 MRPS24Q96EL2 167 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 MEGF10Q96KG7 1140 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 TMEM68Q96MH6 324 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 GMLQ99445 158 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 WRAP53Q9BUR4 548 aaKnown RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 HAPLN2Q9GZV7 340 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 POFUT1Q9H488 388 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ACTL8Q9H568 366 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ZFP64Q9NPA5 681 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 TMEM235A6NFC5 223 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 GPR31O00270 319 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 HPP00738 406 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 DDTP30046 118 aa9.31□□□□□ -0.92
PTPRM-203ENST00000400060 ZNF140P52738 457 aaPredicted RBP9.31□□□□□ -0.92
PTPRM-203ENST00000400060 Q5BKY6 102 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms