RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SELENOFO60613 162 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 ATP1B1P05026 303 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 ADH5P11766 374 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 TMEM115Q12893 351 aaPredicted RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 NDUFAF6Q330K2 333 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 HACD4Q5VWC8 232 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 CD300LDQ6UXZ3 194 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 SMPDL3BQ92485 455 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 COL26A1Q96A83 441 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 NPDC1Q9NQX5 325 aaPredicted RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 ASF1BQ9NVP2 202 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 PURGQ9UJV8 347 aaKnown RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 ASF1AQ9Y294 204 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 PCYT1BQ9Y5K3 369 aaPredicted RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 A0A1B0GW55 424 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 H7BY64 318 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 CDC123O75794 336 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 NFATC1O95644 943 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DUX4L2P0CJ85 424 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DUX4L3P0CJ86 424 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DUX4L4P0CJ87 422 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DUX4L5P0CJ88 424 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DUX4L6P0CJ89 424 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DUX4L7P0CJ90 424 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 ANXA11P50995 505 aaKnown RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 RAB13P51153 203 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 UBE2IP63279 158 aaKnown RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 MEPCEQ7L2J0 689 aaKnown RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 TMED4Q7Z7H5 227 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 PRAP1Q96NZ9 151 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 KLHL42Q9P2K6 505 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DUX4Q9UBX2 424 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 SLC7A7Q9UM01 511 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 HMGN1P05114 100 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 GRPRP30550 384 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 OMPP47874 163 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 LUMP51884 338 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 ST8SIA6P61647 398 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DYRK1AQ13627 763 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 GUCA2BQ16661 112 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 SSX6Q7RTT6 188 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 TPRA1Q86W33 373 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 SLC22A8Q8TCC7 542 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 RGMAQ96B86 450 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 CPNE2Q96FN4 548 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 OR52D1Q9H346 318 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 TMEM231Q9H6L2 316 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 SYNDIG1Q9H7V2 258 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 A0A1W2PS29 197 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 PRICKLE3O43900 615 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 TMPRSS11DO60235 418 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 GALR3O60755 368 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 C1orf105O95561 183 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 ART1P52961 327 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 DLX5P56178 289 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 AP3S2P59780 193 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 ZNF805Q5CZA5 627 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 FAM69AQ5T7M9 428 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 YOD1Q5VVQ6 348 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 SEZ6L2Q6UXD5 910 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 OR6V1Q8N148 313 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 ZMYND19Q96E35 227 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 C7orf50Q9BRJ6 194 aaKnown RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 GPR174Q9BXC1 333 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 GLIPR2Q9H4G4 154 aa15.78■□□□□ 0.12
PTPRA-205ENST00000399903 POLMQ9NP87 494 aaPredicted RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 EXOGQ9Y2C4 368 aaKnown RBP15.78■□□□□ 0.12
PTPRA-205ENST00000399903 SDK1Q7Z5N4 2213 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 SCN8AQ9UQD0 1980 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 IGLV3-16A0A075B6K0 115 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 TMEM200CA6NKL6 621 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 PSMB5P28074 263 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 RAG2P55895 527 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 PM20D2Q8IYS1 436 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 STK35Q8TDR2 534 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 THEM6Q8WUY1 208 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 PPP1R16AQ96I34 528 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 ZNF75AQ96N20 296 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 POT1Q9NUX5 634 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 KLHL28Q9NXS3 571 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 OPN4Q9UHM6 478 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 GNG8Q9UK08 70 aa15.77■□□□□ 0.12
PTPRA-205ENST00000399903 TCF20Q9UGU0 1960 aaKnown RBP15.77■□□□□ 0.11
PTPRA-205ENST00000399903 TRBV23-1A0A0A0MS06 115 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 FOXE1O00358 373 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-205ENST00000399903 LIPCP11150 499 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 SSR2P43308 183 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 LBX1P52954 281 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 TGM3Q08188 693 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 AGERQ15109 404 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 HENMT1Q5T8I9 393 aaKnown RBP15.77■□□□□ 0.11
PTPRA-205ENST00000399903 NIPAL3Q6P499 406 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF620Q6ZNG0 422 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 FAM83HQ6ZRV2 1179 aaPredicted RBP15.77■□□□□ 0.11
PTPRA-205ENST00000399903 TMEM17Q86X19 198 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 BRIX1Q8TDN6 353 aaKnown RBP15.77■□□□□ 0.11
PTPRA-205ENST00000399903 DUSP19Q8WTR2 217 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 GLYATL1Q969I3 302 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 ANKRD19PQ9H560 264 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms